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biomoca
30 May 2006 | Tools | Contributor(s): Reza Toghraee, Umberto Ravaioli
Ion channel simulator
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Hydrophobicity Lab
24 Jul 2006 | Tools | Contributor(s): Eric Darve, Artit Wangperawong, Kazutora Hayashida
Study hydrophobicity and how Lennard Jones particles cluster in a polar solvent
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PNP Cyclic Peptide Ion Channel Model
04 Apr 2007 | Tools | Contributor(s): Brian Radak, Hyonseok Hwang, George C. Schatz, Mark Ratner
This tool simulates ion flow in a system modeled after cyclic peptide ion channels using Poisson-Nernst-Planck (PNP) theory.
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MIT Atomic-Scale Modeling Toolkit
15 Jan 2008 | Tools | Contributor(s): David A Strubbe, Enrique Guerrero, daniel richards, Elif Ertekin, Jeffrey C Grossman, Justin Riley
Tools for Atomic-Scale Modeling