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  1. PhysiCell for tumor3D for ML

    22 Nov 2021 | Contributor(s): Randy Heiland, Paul Macklin

    App to for the IU HuBMAP ML team

  2. Nano-Educators Topical Seminar Series

    12 Jan 2022 | Series | Contributor(s): NACK Network

    Please join us for a more in-depth dive of select nanotechnology topics, including resources and tips on how to share these ideas with your students. This series consists of 16 self-contained topics split between March-April and September-October. Though targeted for undergraduate studies,...

  3. CompuCell3D - Simulation of cell crawling in 3D

    03 Feb 2022 | Tools

    Deploys the CompuCell3D simulation of cell crawling in 3D by Fortuna et al. 2020 https://doi.org/10.1016/j.bpj.2020.04.024

  4. Gateways 2021 Tutorial: SimTools—Software tools that are FAIR

    07 Dec 2021 | Online Presentations | Contributor(s): Steven Clark, Daniel Mejia, Alejandro Strachan

    In this tutorial, we will walk attendees through how SimTools operate within the nanoHUB.org gateway. In a 90-minute session designed for beginners, attendees will create an account on nanoHUB to complete hands-on activities during the tutorial. Some experience with Python is preferred.

  5. Viral Kinetics: Competition Between Infections for Limited Resources

    29 Nov 2021 | Tools | Contributor(s): Shores, Benjamin Randall

    Tool for teaching the general effects of competition on co-infection.

  6. Designing Machine Learning Surrogates for Molecular Dynamics Simulations

    25 Nov 2021 | Online Presentations | Contributor(s): JCS Kadupitiya

    Molecular dynamics (MD) simulations accelerated by high-performance computing (HPC) methods are powerful tools for investigating and extracting the microscopic mechanisms characterizing the properties of soft materials such as self-assembled nanoparticles, virus capsids, confined electrolytes,...

  7. Free Unified Rendering in Python

    24 Nov 2021 | Online Presentations | Contributor(s): Eleftherios Garyfallidis

    FURY is a new visualization engine and platform for 3D+ animations involving scientific data. It provides both desktop and web-based versions using an easily accessible Pythonic API. In addition, for experienced programmers it allows to directly access the GPU and program using shading...

  8. Characterization - Atomic Force Microscopy

    12 Jan 2022 | Online Presentations | Contributor(s): Wesley C. Sanders, NACK Network

  9. OOMMF on nanoHUB - A Quick Demonstration

    22 Nov 2021 | Online Presentations | Contributor(s): Michael Joseph Donahue

    A quick demonstration of OOMMF, Object Oriented MicroMagnetic Framework, on nanoHUB.

  10. Autonomous Neutron Diffraction Experiments with ANDiE

    14 Nov 2021 | Online Presentations | Contributor(s): Austin McDannald

    This tutorial will cover the working principles of ANDiE, how physics was encoded into the design, and demonstrate how ANDiE can be used to autonomously control neutron diffraction experiments.

  11. Charged-Particle Interaction Analysis

    07 Jan 2022 | Online Presentations | Contributor(s): Atilla Ozgur Cakmak, NACK Network

    Scanning Electron Microscopy (SEM) has traditionally been the most frequently used micro-/nano- characterization technique to overcome the optical losses coming from lenses. In this talk we are going to begin by discussing the fundamental blocks of an SEM starting from the electron beam emission....

  12. Fun with Carbon Nanostructures using Crystal Viewer 2.3.4

    02 Nov 2021 | Online Presentations | Contributor(s): Tanya Faltens

    Quick tutorial/demonstration on how to create carbon nanostructures (buckyballs, graphene sheets, and carbon nanotubes) using Crystal Viewer 2.3.4.

  13. Get your feet wet! An Introduction to the nanoHUB Simulation Environment

    29 Oct 2021 | Online Presentations | Contributor(s): Tanya Faltens, The Micro Nano Technology - Education Center

    This presentation will demonstrate some nanoHUB functionalities for educators and showcase a few interactive Jupyter notebooks, simulation tools and educational modules.

  14. Multicellular modeling of mRNA vaccine-loaded lipid nanoparticles for cancer immunotherapy

    05 Nov 2021 | Tools | Contributor(s): Yafei Wang, Michael Getz, Randy Heiland, Paul Macklin

    Simulation mRNA vaccine-loaded lipid nanoparticles (LNPs) for cancer immunotherapy with PhysiCell

  15. Materials Query for Optical Applications

    05 Dec 2021 | Tools | Contributor(s): Shivam Tripathi, Saswat Mishra, Alejandro Strachan

    This tool queries all the cubic materials in the MP database, then a set of mechanical and optical properties based filters are applied to downselect the materials appropriate for optical applications

  16. Chemical Vapor Deposition 2 Modes, 1D, 2D

    07 Jan 2022 | Online Presentations | Contributor(s): Terry Kuzma, NACK Network

    The foundations of Chemical Vapor Deposition (CVD) will be reviewed, with a focus on Low Pressure CVD (LPCVD), typical deposition system design, and the two modes of deposition.

  17. Cadmium Selenide Synthesis, Characterization and Modeling

    22 Oct 2021 | Teaching Materials | Contributor(s): Shelby Hatch, Evan R. Trivedi, Baudilio Tejerina, George C. Schatz

    This is a combined experiment/computational lab in which cadmium selenide quantum dot nanoparticles are synthesized, their spectra are studied, and the results are modeling using the CNDO/INDO semiempirical electronic structure code. Synthesis and Size Dependent Properties of CdSe Quantum...

  18. Feature Selection for CCA Strength Models

    06 Dec 2021 | Tools | Contributor(s): Zachary D McClure, Alejandro Strachan

    A tool to evaluate dataset of hardness and strength values of complex-concentrated-alloys. Feature selection, optimization, and explanation methods are included.

  19. Fusing Light With Heat: Polaritons for Nanoscale Thermal Transport & Sensing

    07 Oct 2021 | Online Presentations | Contributor(s): Thomas Beechem

    Light exhibits a wave nature.  Phonons do too.  Within the infrared portion of the spectrum, these differing “waves” can interact to form hybrid energy carriers called polaritons.  Polaritons, in turn, provide fundamental advantages for optical functionality and...

  20. What is Nanotechnology?/How Small is a Nanometer?

    12 Jan 2022 | Online Presentations | Contributor(s): Mariel Kolker, Robert Ehrmann, NACK Network

    What is Nanotechnology? And why should I care about it? How Small is a Nanometer? Size & Scale