
dualfoil.py Demonstration Video: UserFriendly Electrochemical Simulations for Porous Electrodes
10 Feb 2016  Online Presentations  Contributor(s): R. Edwin García
Companion demonstration video for the tool dualfoil.py.

dualfoil.py Tutorial: UserFriendly Electrochemical Simulations for Porous Electrodes
10 Feb 2016  Online Presentations  Contributor(s): R. Edwin García
Tutorial lecture for the tool dualfoil.py.

Engineering Diamond Color Centers for Quantum Information and Sensing
11 Feb 2016  Online Presentations  Contributor(s): Philip Hemmer
For over a decade diamond color centers like the nitrogenvacancy (NV) have been investigated for applications ranging from quantum storage registers to room temperature quantum computers to quantum enhanced biosensors. Recently siliconvacancy (SiV) centers in diamond have showed potential to...

Range Decomposition: A Low Communication Algorithm for Solving PDEs on Massively Parallel Machines
07 Feb 2016  Online Presentations  Contributor(s): Tom Manteuffel
The Range Decomposition (RD) algorithm uses nested iteration and adaptive mesh refinement locally before performing a global communication step. Only several such steps are observed to be necessary before reaching a solution within a small multiple of discretization error. The target application...

Preconditioning for DivergenceConforming Discretizations of the Stokes Equations
07 Feb 2016  Online Presentations  Contributor(s): Thomas Benson
Recent years have seen renewed interest in the numerical solution of the Stokes Equations. Of particular interest is the use of infsup stable pairs of finite elements for which weak enforcement of the incompressibility condition implies strong enforcement as well, such as with BDMelements....

NonBlocking Conjugate Gradient Methods for Extreme Scale Computing
07 Feb 2016  Online Presentations  Contributor(s): Paul Eller
Many scientific and engineering applications use Krylov subspace methods to solve large systems of linear equations. For extreme scale parallel computing systems, the dot products in these methods (implemented using allreduce operations in MPI) can limit performance because they are a...

New FOSLS Formulation of Nonlinear Stokes Flow for Glaciers
07 Feb 2016  Online Presentations  Contributor(s): Jeffrey Allen
This talk describes two Firstorder System Leastsquares (FOSLS) formulations of the nonlinear Stokes flow used to model glaciers and ice sheets. The first is a Stress formulation and the second a StressVorticity formulation. Both use fluidity, which is the reciprocal of viscosity and avoid the...

DataCentric Models for Multilevel Algorithms
07 Feb 2016  Online Presentations  Contributor(s): Samuel Guiterrez
Today, computational scientists must contend with a diverse set of supercomputer architectures that are capable of exposing unprecedented levels of parallelism and complexity. Effectively placing, moving, and operating on data residing in complex distributed memory hierarchies is quickly...

LegoGen
05 Feb 2016  Tools  Contributor(s): Scott Michael Louis Slone, Chris Maffeo, AbderRahman N Sobh, Aleksei Aksimentiev
Tool workflow for building DNA Brick structures automatically.

[Illinois] CNST Nanotechnology Workshop 2015
04 Feb 2016  Workshops  Contributor(s): Mustafa Elsayed, Mehmet Toner
The CNST Nanotechnology Workshop highlights University of Illinois research in bionanotechnology and nanomedicine, nanoelectronics and nanophotonics, and nanomaterials and nanomanufacturing, leading to crosscampus and industry collaborations.

[Illinois] Rare Events with LargeImpact: Bioengineering & Clinical Applications of Circulating Tumor Cells
04 Feb 2016  Online Presentations  Contributor(s): Mehmet Toner

Stable Discretizations and Robust Block Preconditioners for FluidStructure Interaction Systems
04 Feb 2016  Online Presentations  Contributor(s): Kai Yang
In our work we develop a family of preconditioners for the linear algebraic systems arising from the arbitrary LagrangianEulerian discretization of some fluidstructure interaction models. After the time discretization, we formulate the fluidstructure interaction equations as saddle point...

High Dimensional Uncertainty Quantification via Multilevel Monte Carlo
04 Feb 2016  Online Presentations  Contributor(s): Hillary Fairbanks
Multilevel Monte Carlo (MLMC) has been shown to be a cost effective way to compute moments of desired quantities of interest in stochastic partial differential equations when the uncertainty in the data is highdimensional. In this talk, we investigate the improved performance of MLMC versus...

Plasmonics and Metasurfaces for Extreme Manipulation of Light
08 Mar 2016  Online Presentations  Contributor(s): Yongmin Liu
In this talk, I will present some of our work in the fascinating field of plasmonics and optical metasurfaces. First, I will discuss reconfigurable plasmonic lenses operating in microfluidic environment, which can dynamically diverge, collimate and focus surface plasmons [5]. Second, I will...

Discretization of Elliptic Differential Equations Using Sparse Grids and Prewavelets
04 Feb 2016  Online Presentations  Contributor(s): Christoph Pflaum
Sparse grids can be used to discretize second order elliptic differential equations on a ddimensional cube. Using Galerkin discretization, we obtain a linear equation system with unknowns. The corresponding discretization error is in the norm. A major difficulty in...

Multilevel Markov Chain Monte Carlo for Uncertainty Quantification in Subsurface Flow
04 Feb 2016  Online Presentations  Contributor(s): Christian Ketelsen
The multilevel Monte Carlo method has been shown to be an effective variance reduction technique for quantifying uncertainty in subsurface flow simulations when the random conductivity field can be represented by a simple prior distribution. In stateoftheart subsurface simulation the...

Spacetime constrained FOSLS with AMGe upscaling
04 Feb 2016  Online Presentations  Contributor(s): Panayot Vassilevski
We consider timedependent PDEs discretized in combined spacetime domains. We first reduce the PDE to a first order system. Very often in practice, one of the equations of the reduced system involves the divergence operator (in spacetime). The popular FOSLS (first order system leastsquares)...

Reducing Communication Costs for Sparse Matrix Multiplication within Algebraic Multigrid
04 Feb 2016  Online Presentations  Contributor(s): Grey Ballard
We consider the sequence of sparse matrixmatrix multiplications performed during the setup phase of algebraic multigrid. In particular, we show that the most commonly used parallel algorithm is often not the most communicationefficient one for all of the matrix multiplications involved. By...

Is the Ideal Approximation Operator Always "Ideal" for a Particular C/F Splitting?
04 Feb 2016  Online Presentations  Contributor(s): Erin Molloy
Given a coarse grid, the ideal prolongation operator is defined by , where the weight matrix, , interpolates a set of fine grid variable (points) from a set of coarse grid variable (points), and the identity matrix, , represents the injection of points to and from...

On the Preconditioning of a HighOrder RDGbased AllSpeed NavierStokes Solver
04 Feb 2016  Online Presentations  Contributor(s): Brian Weston
We investigate the preconditioning of an allspeed NavierStokes solver, based on the orthogonalbasis Reconstructed Discontinuous Galerkin (RDG) space discretization, and integrated using a highorder fullyimplicit time discretization method. The work is motivated by applications in Additive...