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cadnano to PDB File Converter

By Jejoong Yoo, AbderRahman N Sobh1, Chen-Yu Li1, Aleksei Aksimentiev1

1. University of Illinois at Urbana-Champaign

Accepts CadNano files in the form of *.json and outputs a file in *.pdb which can be read by programs such as VMD.

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Version 1.0f - published on 02 May 2014

doi:10.4231/D3V698C32 cite this

This tool is closed source.

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World usage

Location of all "cadnano to PDB File Converter" Users Since Its Posting

Simulation Users


10 15 15 31 39 39 42

Users By Organization Type
Type Users
Unidentified 26 (61.9%)
Educational - University 15 (35.71%)
National Lab 1 (2.38%)
Users by Country of Residence
Country Users
us UNITED STATES 9 (60%)
dz ALGERIA 3 (20%)
br BRAZIL 1 (6.67%)
in INDIA 1 (6.67%)
gb UNITED KINGDOM 1 (6.67%)

Simulation Runs


54 113 137 200 245 249 260
Average Total
Wall Clock Time 21.71 hours 102.22 days
CPU time 5.4 minutes 10.17 hours
Interaction Time 2.18 hours 10.28 days

No classroom usage data was found. You may need to enable JavaScript to view this data., a resource for nanoscience and nanotechnology, is supported by the National Science Foundation and other funding agencies. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.