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PNP Cyclic Peptide Ion Channel Model

By Brian Radak1, Hyonseok Hwang2, George C. Schatz1, Mark Ratner1

1. Northwestern University 2. Kangwon National University, Kangwon-do, Rep. of Korea

This tool simulates ion flow in a system modeled after cyclic peptide ion channels using Poisson-Nernst-Planck (PNP) theory.

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Version 1.1.3 - published on 03 Feb 2014

doi:10.4231/D35717N78 cite this

Open source: license | download

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Usage

World usage

Location of all "PNP Cyclic Peptide Ion Channel Model" Users Since Its Posting

Simulation Users

212

2 3 5 5 5 5 7 10 17 22 31 36 38 39 42 53 57 61 66 71 75 77 78 80 82 82 87 88 90 92 97 104 106 109 113 115 117 117 118 118 120 122 123 124 126 130 133 133 134 135 138 140 143 143 144 144 144 144 144 145 147 149 149 152 153 154 157 158 172 172 176 176 176 177 181 181 184 184 187 190 191 193 196 197 197 199 200 204 205 208 210 210 211 211 212 212

Users By Organization Type
Type Users
Educational - University 160 (75.47%)
Unidentified 23 (10.85%)
Industry 11 (5.19%)
Educational - Pre-College 6 (2.83%)
Unemployed 5 (2.36%)
National Lab 4 (1.89%)
Government Agency 2 (0.94%)
Military 1 (0.47%)
Users by Country of Residence
Country Users
us UNITED STATES 112 (70.89%)
in INDIA 14 (8.86%)
ca CANADA 6 (3.8%)
cn CHINA 5 (3.16%)
kr KOREA, REPUBLIC OF 5 (3.16%)
it ITALY 4 (2.53%)
co COLOMBIA 4 (2.53%)
at AUSTRIA 3 (1.9%)
se SWEDEN 3 (1.9%)
dk DENMARK 2 (1.27%)

Simulation Runs

1,403

7 21 39 39 40 49 71 95 126 136 159 267 285 288 304 344 362 373 385 397 401 405 406 410 417 417 430 432 436 449 465 480 483 497 509 517 523 523 530 530 536 546 573 627 635 648 658 658 665 668 678 682 687 687 695 695 695 727 729 732 738 743 746 755 756 757 764 767 868 868 878 878 878 882 888 889 902 902 905 910 912 930 947 952 952 982 993 1014 1016 1234 1334 1369 1400 1400 1403 1403
Overview
Average Total
Wall Clock Time 5.03 hours 161.52 days
CPU time 3.61 minutes 1.93 days
Interaction Time 1.18 hours 37.97 days

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