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Population Density Modulates Antibiotic Efficacy, Treatment Bistability, and the Evolution of Resistance in Bacteria
13 Dec 2016 | | Contributor(s):: Kevin Wood
In this talk, I will discuss our recent work to address these questions by measuring real-time per capita growth of Enterococcus faecalis populations at fixed population densities using multiplexed computer-automated culture devices. We show that density-dependent growth inhibition is pervasive...
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Atomic Resolution Brownian Dynamics
09 Nov 2016 | | Contributor(s):: Chris Maffeo
GPU-accelerated Brownian dynamics simulation tool for biomolecular and nanotechnological systems
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Tissue-Level Communication Through Patterning Of Intercellular Ca2+ Wave Dynamics
21 Nov 2016 | | Contributor(s):: Jeremiah J. Zartman
Here we characterize periodic intercellular Ca2+ waves (ICWs) in a model organ system of epithelial growth and patterning—the Drosophila wing imaginal disc. We developed a novel regulated environment for micro-organs (REM-Chip) device that enable a broad range of genetic, chemical and...
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Decoding the Epigenetic Language of Life
15 Nov 2016 | | Contributor(s):: Jian-Kang Zhu
I will describe work in my lab that has shed light on how DNA methyltransferases and demethylases are guided to specific sequences, and how the antagonistic actions of the enzymes are coordinated to generate proper DNA methylation patterns. I will also describe some of our recent work on how DNA...
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Coarse Graining of Crystalline Cellulose
29 Jul 2016 | | Contributor(s):: Kuo Tian, Mehdi Shishehbor, Pablo Daniel Zavattieri
Bio-inspired Crystalline Nano-Cellulose coarse graining toolkit
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MidQBio 2016: 4th Midwest Quantitative Biology Symposium
22 Oct 2016 | | Contributor(s):: Srividya Iyer-Biswas, Tamara L. Kinzer-Ursem, Andrew Mugler
The MidQBio Symposium aims to bring together research groups from around the Midwest with a shared interest in quantitative biology, and to help build a community of these researchers. The symposium provides researchers opportunities to meet periodically to disseminate recent results; network...
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The Epithelial-Mesenchymal Transition Its role in metastasis? Can Theory Help Cancer Biology?
19 Oct 2016 | | Contributor(s):: Herbert Levine
In order to spread from the primary tumor to distant sites, cancer cells must undergo a coordinated change in their phenotypic properties referred to as the "epithelial-to-mesenchymal" transition. We have studied the nonlinear genetic circuits that are responsible for this...
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ENBIOS-2D Lab
18 Jul 2016 | | Contributor(s):: Aldi Hoxha, Paolo Scarbolo, Andrea Cossettini, Federico Pittino, Luca Selmi
A tool to simulate Ion Sensitive Field Effect Transistors in two dimensions
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Collective Sensing by Communicating Cells
21 Sep 2016 | | Contributor(s):: Andrew Mugler
In this talk I will describe recent theoretical and experimental results in which this question is explored in several contexts, including gradient detection by groups of epithelial cells. I will show how communication allows cells to perform qualitatively new behaviors that single cells cannot...
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Hydrogel based Biochemical Sensors
01 Jul 2016 | | Contributor(s):: Piyush Dak, Muhammad A. Alam
This is MATLAB code for a Hydrogel based biochemical sensor: The sensor is composed of a hydrogel sandwiched between a rigid porous membrane and a deformable membrane. The hydrogel is pendent with the ionizable groups (with density, Nf and acid dissociation constant, Ka) which are...
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Photonic Crystal Enhanced Microscopy (PCEM) for Studying the Invasiveness of Glioblastoma Multiforme (GBM) Cells
08 Jul 2016 | | Contributor(s):: Lydia Kwon
Bionanotechnology Seminar Series
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E304 L10.1.2: Nanobiotechnology - Information Storage and Retrieval in the Cell
15 Apr 2016 | | Contributor(s):: ASSIST ERC
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E304 L10.1.3: Nanobiotechnology - Energy Generation and Storage Within the Cell
15 Apr 2016 | | Contributor(s):: ASSIST ERC
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E304 L10.1.4: Nanobiotechnology - Application: Molecular Motors
15 Apr 2016 | | Contributor(s):: ASSIST ERC
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[Illinois] Hybrid Molecular-Scale Materials
10 Jun 2016 | | Contributor(s):: Maiken Mikkelsen
Plasmonics and Applications Workshop 2016 Hybrid Molecular-Scale Materials Maiken Mikkelsen 3.21.16
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[Illinois] ECE 564 Lecture 20
08 Jun 2016 | | Contributor(s):: Gabriel Popescu
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[Illinois] ECE 564 Lecture 22
08 Jun 2016 | | Contributor(s):: Gabriel Popescu
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E304 L9.1.5: Nanofluidics - Application: Electrokinetic Pumps
15 Apr 2016 | | Contributor(s):: ASSIST ERC
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ENBIOS-1D Lab
14 Dec 2015 | | Contributor(s):: Paolo Scarbolo, Federico Pittino, Matteo , Andrea Cossettini, Luca Selmi
A tool to simulate Electrolyte/Insulator/Semiconductor systems in one dimension
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[Illinois] Plasmonics and Its Applications Workshop 2016
13 Apr 2016 | | Contributor(s):: George C. Schatz, Bjorn Reinhard, Jennifer Hollingsworth, Kathy Willets, Jeremy Smith, AbderRahman N Sobh, Jao van de Lagemaat, Amanda Haes, Maiken Mikkelsen, Prashant Nagpal, sayantani ghosh, Emad Tajkhorshid, Nicholas Kotov, Anatoily Pinchuk
The study of plasmonics has been around for several decades now. The study of the interaction between the electromagnetic field and the free electrons in metal have been found as advantageous for applications in devices and more recently, in biological systems. The focus of this workshop...