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Molecular Dynamics Showcase
06 Jul 2013 | | Contributor(s):: Michael McLennan, Chen-Yu Li, john stone, Aleksei Aksimentiev, George A. Howlett
View interesting features of a molecular dynamics trajectory file
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[Illinois] Physics 550 Biomolecular Physics
03 Sep 2013 | | Contributor(s):: Klaus Schulten, Taekjip Ha
Physical concepts governing the structure and function of biological macromolecules; general properties, spatial structure, energy levels, dynamics and functions, and relation to other complex physical systems such as glasses; recent research in biomolecular physics;...
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Neural Systems Modeling Ch10-13 Master Tool
02 Aug 2013 | | Contributor(s):: Jessica S Johnson, NanoBio Node
Combination of all tools used in Chapters 10-13 of Neural Systems Modeling by Anastasio
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[Illinois]: Neural Systems Modeling Ch 6-9 Master Tool
26 Jul 2013 | | Contributor(s):: Jessica S Johnson, NanoBio Node
Combination of all tools used in Chapters 6-9 of Neural Systems Modeling by Anastasio
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[Illinois]: Error Gradient Estimations Due to Parallel Perturbation of Weights
07 Jul 2013 | | Contributor(s):: AbderRahman N Sobh, Jessica S Johnson, NanoBio Node
This tool trains two-layered networks of sigmoidal units to associate patterns using simultaneous perturbation of weights.
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[Illinois]: Perturbative Reinforcement Learning to Develop Distributed Representations
10 Jul 2013 | | Contributor(s):: AbderRahman N Sobh, Jessica S Johnson, NanoBio Node
This tool trains three-layered networks of sigmoidal units to associate patterns.
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[Illinois]: Perturbative Reinforcement Learning Using Directed Drift
10 Jul 2013 | | Contributor(s):: AbderRahman N Sobh, Jessica S Johnson, NanoBio Node
This tool trains two-layered networks of sigmoidal units to associate patterns using a real-valued adaptation of the directed drift algorithm.
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[Illinois]: Temporal Difference, Iterative Dynamic Programming, and Least Mean Squares
11 Jul 2013 | | Contributor(s):: Bara Saadah, Nahil Sobh, AbderRahman N Sobh, Jessica S Johnson
This tool updates state values using the Temporal Difference Algorithm.
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Crystalline Cellulose - Atomistic Toolkit
17 Jul 2013 | | Contributor(s):: Mateo Gómez Zuluaga, Robert J. Moon, Fernando Luis Dri, Pablo Daniel Zavattieri
Crystalline Cellulose - Atomistic Toolkit
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[Illinois] GEM4 Bionanotechnology Summer Institute 2013
30 Jul 2013 |
INSTITUTE FOCUS:Cancer Nanotechnology and Cellular MechanicsOBJECTIVESThe overall objective is to enhance the ability to address overarching challenges in the areas of Cancer Nanotechnology and Mechanobiology. Highly interdisciplinary in nature, the 2013 Summer Institute will offer...
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[Illinois] Genetic Engineering for Nisin Diffusion and Tool Walkthrough
23 Jul 2013 | | Contributor(s):: Asha Kirchhoff
In this video Illinois Bioengineering student Asha Kirchhoff discusses the fundamentals behind the Biomedical Engineering Society's Nisin Diffusion experiment and setup for Engineering Open House. She also provides a walkthrough for the Nisin Diffusion tool hosted here at Nanohub.org.
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[Illinois]: Direction Selectivity
13 Jul 2013 | | Contributor(s):: Bara Saadah, Nahil Sobh, AbderRahman N Sobh, Jessica S Johnson, NanoBio Node
This tool implements a simple direction selective network.
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[Illinois]: Predict Correct Set Up
15 Jul 2013 | | Contributor(s):: Bara Saadah, Nahil Sobh, AbderRahman N Sobh, Jessica S Johnson, NanoBio Node
This tool sets up a predictor-corrector model of target tracking
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[Illiniois]: SynchUp
16 Jul 2013 | | Contributor(s):: Bara Saadah, Nahil Sobh, AbderRahman N Sobh, Jessica S Johnson, NanoBio Node
This tool computes synchronous updates of autoassociative networks.
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[Illinois]: AsynchUp
16 Jul 2013 | | Contributor(s):: Bara Saadah, Nahil Sobh, AbderRahman N Sobh, NanoBio Node, Jessica S Johnson
This tool computes asynchronous updates of autoassociative networks.
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[Illinois] KohonenSOM
09 Jul 2013 | | Contributor(s):: Bara Saadah, Nahil Sobh, Jessica S Johnson, NanoBio Node
This tool implements the Kohonen self-organizing map (SOM) algorithm
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[Illinois]: BUTDprobInference
17 Jul 2013 | | Contributor(s):: Bara Saadah, Jessica S Johnson, NanoBio Node
This tool stimulates bottom-up/top-down processing in the visual system using probabilistic inference.
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[Illinois]: BUTDjointDistribution
16 Jul 2013 | | Contributor(s):: Bara Saadah, Jessica S Johnson, NanoBio Node
this tool simulates bottom-up/top-down processing in the visual system using the joint distribution
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[Illinois]: Running Average
10 Jul 2013 | | Contributor(s):: Bara Saadah, Nahil Sobh, Jessica S Johnson, NanoBio Node
This tool implements a running average of a noise series.
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[illinois] BioMEMS and Bionanotechnology: Integration of Life Sciences and Engineering at the Micro and Nanoscale
10 Jul 2013 | | Contributor(s):: Rashid Bashir