-
PhysiCell analysis for breast cancer metastasis model
16 Nov 2023 | Contributor(s):: Randy Heiland, Lima Da Rocha, Heber, Paul Macklin
PhysiCell model analysis of breast cancer metastasis
-
PhysiCell Studio worms model
04 Aug 2023 | Contributor(s):: Randy Heiland
Simulate worms using PhysiCell Studio
-
PhysiCell Studio
22 Jun 2023 | | Contributor(s):: Randy Heiland, Paul Macklin
PhysiCell Studio tool to build multicellular models
-
PhysiCell modeling demos
04 Jun 2023 | | Contributor(s):: Randy Heiland, Paul Macklin
PhysiCell modeling demos
-
Jul 25 2022
2022 PhysiCell Workshop
PhysiCell is an open source, agent-based simulation framework for simulating complex multicellular systems. It simulates the chemical environment (diffusion of substrates and signaling factors),...
https://nanohub.org/events/details/2186
-
Multiscale model of the different modes of invasion
02 Jun 2022 | | Contributor(s):: Marco Ruscone, Arnau Montagud, Laurence Calzone, Vincent Noel
Simulate 2D/3D cancer cell invasion in extracellular matrix with PhysiBoSS
-
May 20 2022
2022 PhysiCell Workshop and Hackathon Application Deadline
PhysiCell Workshop & Hackathon - 2022Dates: July 24 - 30, 2022Time: 11:00 a.m - 6:00 p.m EDT (main session takes place Mon-Fri)This virtual event consists of two parts: the free...
https://nanohub.org/events/details/2178
-
PhysiCell for cell mechanics on a 2D membrane
24 Mar 2022 | | Contributor(s):: Randy Heiland, Paul Macklin, Shakeel Ahamed Davanagere
Simulate cell dynamics near a curved membrane in 2D
-
PhysiCell COVID19 model v6 test
11 Feb 2022 | | Contributor(s):: Randy Heiland, Paul Macklin
PhysiCell COVID19 model v6 early testing
-
PhysiCell learning by examples
01 Feb 2022 | | Contributor(s):: Randy Heiland, Paul Macklin
Demonstrate PhysiCell modeling via sample models
-
PhysiCell for Kidney FTU
20 Jan 2022 | | Contributor(s):: Randy Heiland, Paul Macklin
PhysiCell Model for the HuBMAP Kidney FTU (v2)
-
PhysiCell for tumor3D for ML
22 Nov 2021 | | Contributor(s):: Randy Heiland, Paul Macklin
App to for the IU HuBMAP ML team
-
PhysiCell for Kidney FTU
28 Sep 2021 | | Contributor(s):: Randy Heiland, Paul Macklin
PhysiCell Model for the HuBMAP Kidney FTU
-
PhysiCell simulation of GBM tumour under oHSV1 treatment
28 Mar 2021 | | Contributor(s):: Adrianne Jenner, Randy Heiland, Paul Macklin
Simulation for GBM fragment growth under oHSV1 treatment published in Jenner et al. (2021)
-
How Simple Cell-Cell Interactions Lead to Complex Multicellular Dynamics
04 Feb 2021 | | Contributor(s):: Paul Macklin
In this talk, we use agent-based simulation models to simulate (1) individual cell behaviors, (2) cell-cell interactions, and (3) cell-environment interactions to show how simple rules can give rise to complex multicellular phenomena. We showcase and explore free, interactive online tools to...
-
Biology of COVID-19 Attack on Epithelial Cells, understood from a Modeling and Simulation Perspective
04 Feb 2021 | | Contributor(s):: Paul Macklin
n this session, we describe a community-driven effort to iteratively develop a multiscale, spatially-resolved open source model of SARS-CoV-2 dynamics and immune response in tissues.
-
PhysiCell 3D tumor
20 Jan 2021 | | Contributor(s):: Randy Heiland, Paul Macklin, Koudoro, Serge, Javier Guaje
Simulate a 3D spheroid cancer tumor with PhysiCell
-
Cycle Training App for PhysiCell
18 Dec 2020 | | Contributor(s):: Furkan Kurtoglu, Aneequa Sundus, Kali Nicole Konstantinopoulos, Drew Willis, Mary Chen, Randy Heiland, Paul Macklin
Training application for "Cycle" concept in PhysiCell.
-
Three-Type Multicellular Simulation Lab
09 Nov 2020 | | Contributor(s):: Paul Macklin, Randy Heiland
An analog of the 3-body problem: modeling 3 interacting cell types in a dynamic environment
-
PhysiBoSS simulation of COVID19 infection
27 Oct 2020 | | Contributor(s):: Vincent Noel, Miguel Ponce de Leon, Anna Niarakis, Laurence Calzone, Alfonso Valencia, Arnau Montagud
PhysiBoSS-COVID: the Boolean modelling of COVID-19 signalling pathways in a multicellular simulation framework