Tags: simulation and modeling

Tools (1-8 of 8)

  1. cadnano to PDB File Converter

    13 Nov 2013 | | Contributor(s):: Jejoong Yoo, AbderRahman N Sobh, Chen-Yu Li, Aleksei Aksimentiev

    Accepts CadNano files in the form of *.json and outputs a file in *.pdb which can be read by programs such as VMD.

  2. CNDO/INDO

    09 Oct 2007 | | Contributor(s):: Baudilio Tejerina, Jeff Reimers

    Semi-empirical Molecular Orbital calculations.

  3. Comb Drive Levitation

    19 Jan 2010 | | Contributor(s):: Fengyuan (Thomas) Li, jason clark

    Model comb drive levitation effect with Schwarz-Christoffel based algorithm

  4. Functionalization Workbench

    30 Aug 2013 | | Contributor(s):: AbderRahman N Sobh, Chen-Yu Li, Nahil Sobh, Aleksei Aksimentiev

    Using molecular dynamic simulation - explore the interactions between a molecular structure and substrate when they are linked together.

  5. LegoGen

    05 Feb 2016 | | Contributor(s):: Scott Michael Louis Slone, Chris Maffeo, AbderRahman N Sobh, Aleksei Aksimentiev

    Tool workflow for building DNA Brick structures automatically.

  6. Nano-Plasmonic Bowtie Antenna Simulator

    18 Mar 2008 | | Contributor(s):: Alexander S McLeod, Jeffrey B. Neaton, P. James Schuck, Eugene Song, Graham Chapman

    A tool for simulating the near-field enhancement effects of nano-scale bowtie antennae.

  7. SPICE Subcircuit Generator for Ferromagnetic Nanomaterials

    11 Jan 2018 | | Contributor(s):: Onur Dincer, Azad Naeemi

    Generates SPICE subcircuit netlist for ferromagnetic nanometarials for spintronic devices

  8. Thermoelectric Power Factor Calculator for Nanocrystalline Composites

    18 Oct 2008 | | Contributor(s):: Terence Musho, Greg Walker

    Quantum Simulation of the Seebeck Coefficient and Electrical Conductivity in a 2D Nanocrystalline Composite Structure using Non-Equilibrium Green's Functions