Tags: VMD

All Categories (1-9 of 9)

  1. Request for more instructions and explanation

    Closed | Responses: 1

    This pre-made demonstration and learning simulation is a great idea.

    It would be really helpful to augment the instructions with some explanations of what to do _after_ hitting...

    http://nanohub.org/answers/question/1362

  2. cadnano to PDB File Converter

    13 Jan 2014 | Tools | Contributor(s): Jejoong Yoo, AbderRahman N Sobh, Chen-Yu Li, Aleksei Aksimentiev

    Accepts CadNano files in the form of *.json and outputs a file in *.pdb which can be read by programs such as VMD.

    http://nanohub.org/resources/cadnanocvrt

  3. Functionalization Workbench

    13 Jan 2014 | Tools | Contributor(s): AbderRahman N Sobh, Chen-Yu Li

    Using molecular dynamic simulation - explore the interactions between a molecular structure and substrate when they are linked together.

    http://nanohub.org/resources/partsub

  4. Illinois Phys550 Molecular Biophysics

    26 Jan 2010 | Courses | Contributor(s): Klaus Schulten

    Physical concepts governing the structure and function of biological macromolecules; general properties, spatial structure, energy levels, dynamics and functions, and relation to other complex...

    http://nanohub.org/resources/8192

  5. LegoGen

    07 Mar 2016 | Tools | Contributor(s): Scott Michael Louis Slone, Chris Maffeo, AbderRahman N Sobh, Aleksei Aksimentiev

    Tool workflow for building DNA Brick structures automatically.

    http://nanohub.org/resources/legogen

  6. Molecular Dynamics Showcase

    14 Oct 2013 | Tools | Contributor(s): Michael McLennan, Chen-Yu Li, john stone, Aleksei Aksimentiev, George A. Howlett

    View interesting features of a molecular dynamics trajectory file

    http://nanohub.org/resources/mdshowcase

  7. Molecular Dynamics Showcase Builder

    09 Nov 2015 | Tools | Contributor(s): Michael McLennan, Nicholas K Kisseberth, George A. Howlett, Jim Slopsema, Aleksei Aksimentiev, Chen-Yu Li

    Tool to create showcases for the Molecular Dynamics Showcase viewer.

    http://nanohub.org/resources/mdshowbuilder

  8. [Illinois] Interdisciplinary Symposium on Advanced Nano/Biosystems (Design, Fabrication, and Characterization)

    17 Dec 2013 | Workshops

    The Interdisciplinary Symposium on Advanced Nano/Biosystems: Design, Fabrication, and Characterization aims to provide a stimulating discussing forum for recent advances in material design,...

    http://nanohub.org/resources/19478

  9. [Illinois] Physics 550 Biomolecular Physics

    05 Sep 2013 | Courses | Contributor(s): Klaus Schulten, Taekjip Ha

        Physical concepts governing the structure and function of biological macromolecules; general properties, spatial structure, energy levels, dynamics and functions, and...

    http://nanohub.org/resources/19299