# # ChangeLog for trunk # # Generated by Trac 1.0.13 # Nov 8, 2024, 2:02:45 PM Wed, 14 Nov 2007 21:55:14 GMT liveletlive [816] * trunk/optimizer/src/pgapack/pgapack (added) * trunk/optimizer/src/pgapack/pgapack/CHANGES (added) * trunk/optimizer/src/pgapack/pgapack/COPYRIGHT (added) * trunk/optimizer/src/pgapack/pgapack/Makefile (added) * trunk/optimizer/src/pgapack/pgapack/Makefile.in (added) * trunk/optimizer/src/pgapack/pgapack/README (added) * trunk/optimizer/src/pgapack/pgapack/config.status (added) * trunk/optimizer/src/pgapack/pgapack/configure (added) * trunk/optimizer/src/pgapack/pgapack/configure.in (added) * trunk/optimizer/src/pgapack/pgapack/docs (added) * trunk/optimizer/src/pgapack/pgapack/docs/user_guide.ps (added) * trunk/optimizer/src/pgapack/pgapack/examples (added) * trunk/optimizer/src/pgapack/pgapack/examples/Makefile (added) * trunk/optimizer/src/pgapack/pgapack/examples/Makefile.in (added) * trunk/optimizer/src/pgapack/pgapack/examples/README (added) * trunk/optimizer/src/pgapack/pgapack/examples/c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/Makefile (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/Makefile.in (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/README (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/classic (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/classic.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/dejong (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/dejong.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/example (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/example.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/maxbit (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/maxbit.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/maxchar (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/maxchar.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/maxint (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/maxint.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/name (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/name.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/namefull (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/namefull.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/sampleOptimization (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/sampleOptimization.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/test.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/udtstr (added) * trunk/optimizer/src/pgapack/pgapack/examples/c/udtstr.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/Makefile (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/Makefile.in (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/README (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/classic.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/dejong.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/example.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/maxbit.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/maxchar.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/maxint.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/name.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/namefull.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/fortran/pgapackf.h (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/Makefile (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/Makefile.in (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/README (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/grdfcn77.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/hesfcn77.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/objfcn77.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/pgapackf.h (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/ssqfcn77.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/ssqjac77.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/testprog.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/vecfcn77.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/mgh/vecjac77.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/templates (added) * trunk/optimizer/src/pgapack/pgapack/examples/templates/README (added) * trunk/optimizer/src/pgapack/pgapack/examples/templates/uf_native.c (added) * trunk/optimizer/src/pgapack/pgapack/examples/templates/uf_native.f (added) * trunk/optimizer/src/pgapack/pgapack/examples/templates/uf_new.c (added) * trunk/optimizer/src/pgapack/pgapack/include (added) * trunk/optimizer/src/pgapack/pgapack/include/fakempi_h (added) * trunk/optimizer/src/pgapack/pgapack/include/fakempif_h (added) * trunk/optimizer/src/pgapack/pgapack/include/pgapack.h (added) * trunk/optimizer/src/pgapack/pgapack/include/pgapackf.h (added) * trunk/optimizer/src/pgapack/pgapack/lib (added) * trunk/optimizer/src/pgapack/pgapack/lib/generic (added) * trunk/optimizer/src/pgapack/pgapack/lib/linux (added) * trunk/optimizer/src/pgapack/pgapack/man (added) * trunk/optimizer/src/pgapack/pgapack/man/man1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAEncodeIntegerAsBinary.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAEncodeIntegerAsGrayCode.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAEncodeRealAsBinary.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAEncodeRealAsGrayCode.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAEvaluate.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAFitness.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetBinaryAllele.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetCharacterAllele.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetEvaluation.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetEvaluationUpToDateFlag.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetFitness.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetFitnessCmaxValue.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetFitnessMinType.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetFitnessType.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetIntegerAllele.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetIntegerFromBinary.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetIntegerFromGrayCode.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetMaxFitnessRank.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetRealAllele.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetRealFromBinary.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGAGetRealFromGrayCode.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGARank.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGASetBinaryAllele.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGASetCharacterAllele.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGASetEvaluation.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGASetEvaluationUpToDateFlag.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGASetFitnessCmaxValue.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGASetFitnessMinType.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGASetFitnessType.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGASetIntegerAllele.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGASetMaxFitnessRank.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man1/PGASetRealAllele.1 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGAGetBinaryInitProb.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGAGetIntegerInitType.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGAGetMaxIntegerInitValue.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGAGetMaxRealInitValue.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGAGetMinIntegerInitValue.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGAGetMinRealInitValue.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGAGetRandomInitFlag.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGAGetRealInitType.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGASetBinaryInitProb.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGASetCharacterInitType.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGASetIntegerInitPermute.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGASetIntegerInitRange.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGASetRandomInitFlag.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGASetRealInitPercent.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man2/PGASetRealInitRange.2 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGACrossover.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetCrossoverProb.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetCrossoverType.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetMutationBoundedFlag.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetMutationIntegerValue.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetMutationProb.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetMutationRealValue.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetMutationType.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetPTournamentProb.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetRestartAlleleChangeProb.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetRestartFlag.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetRestartFrequencyValue.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetSelectType.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAGetUniformCrossoverProb.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGAMutate.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGARestart.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASelect.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASelectNextIndex.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetCrossoverProb.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetCrossoverType.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetMutationBoundedFlag.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetMutationIntegerValue.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetMutationProb.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetMutationRealValue.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetPTournamentProb.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetRestartAlleleChangeProb.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetRestartFlag.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetRestartFrequencyValue.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetSelectType.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man3/PGASetUniformCrossoverProb.3 (added) * trunk/optimizer/src/pgapack/pgapack/man/man4 (added) * trunk/optimizer/src/pgapack/pgapack/man/man4/PGABuildDatatype.4 (added) * trunk/optimizer/src/pgapack/pgapack/man/man4/PGAGetCommunicator.4 (added) * trunk/optimizer/src/pgapack/pgapack/man/man4/PGAGetNumProcs.4 (added) * trunk/optimizer/src/pgapack/pgapack/man/man4/PGAGetRank.4 (added) * trunk/optimizer/src/pgapack/pgapack/man/man4/PGAReceiveIndividual.4 (added) * trunk/optimizer/src/pgapack/pgapack/man/man4/PGASendIndividual.4 (added) * trunk/optimizer/src/pgapack/pgapack/man/man4/PGASendReceiveIndividual.4 (added) * trunk/optimizer/src/pgapack/pgapack/man/man4/PGASetCommunicator.4 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGACheckSum.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGAGetBestIndex.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGAGetRandomSeed.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGAGetWorstIndex.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGAHammingDistance.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGAMean.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGARandom01.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGARandomFlip.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGARandomGaussian.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGARandomInterval.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGARandomUniform.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGARound.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGASetRandomSeed.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man5/PGAStddev.5 (added) * trunk/optimizer/src/pgapack/pgapack/man/man6 (added) * trunk/optimizer/src/pgapack/pgapack/man/man6/PGAError.6 (added) * trunk/optimizer/src/pgapack/pgapack/man/man6/PGAGetMaxMachineDoubleValue.6 (added) * trunk/optimizer/src/pgapack/pgapack/man/man6/PGAGetMaxMachineIntValue.6 (added) * trunk/optimizer/src/pgapack/pgapack/man/man6/PGAGetMinMachineDoubleValue.6 (added) * trunk/optimizer/src/pgapack/pgapack/man/man6/PGAGetMinMachineIntValue.6 (added) * trunk/optimizer/src/pgapack/pgapack/man/man7 (added) * trunk/optimizer/src/pgapack/pgapack/man/man7/PGAGetPrintFrequencyValue.7 (added) * trunk/optimizer/src/pgapack/pgapack/man/man7/PGAPrintContextVariable.7 (added) * trunk/optimizer/src/pgapack/pgapack/man/man7/PGAPrintIndividual.7 (added) * trunk/optimizer/src/pgapack/pgapack/man/man7/PGAPrintPopulation.7 (added) * trunk/optimizer/src/pgapack/pgapack/man/man7/PGAPrintReport.7 (added) * trunk/optimizer/src/pgapack/pgapack/man/man7/PGAPrintString.7 (added) * trunk/optimizer/src/pgapack/pgapack/man/man7/PGASetPrintFrequencyValue.7 (added) * trunk/optimizer/src/pgapack/pgapack/man/man7/PGASetPrintOptions.7 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAChange.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGACheckStoppingConditions.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGACopyIndividual.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGACreate.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGADestroy.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGADone.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGADuplicate.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetDataType.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetGAIterValue.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetMaxGAIterValue.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetMutationAndCrossoverFlag.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetMutationOrCrossoverFlag.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetNoDuplicatesFlag.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetNumReplaceValue.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetOptDirFlag.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetPopReplaceType.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetPopSize.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetSortedPopIndex.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetStoppingRuleType.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAGetStringLength.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGARun.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGARunGM.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGARunMutationAndCrossover.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGARunMutationOrCrossover.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetMaxGAIterValue.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetMaxNoChangeValue.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetMaxSimilarityValue.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetMutationAndCrossoverFlag.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetMutationOrCrossoverFlag.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetNoDuplicatesFlag.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetNumReplaceValue.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetPopReplaceType.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetPopSize.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetStoppingRuleType.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetUp.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASetUserFunction.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGASortPop.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/man8/PGAUpdateGeneration.8 (added) * trunk/optimizer/src/pgapack/pgapack/man/mandesc (added) * trunk/optimizer/src/pgapack/pgapack/man/manl (added) * trunk/optimizer/src/pgapack/pgapack/man/manl/PGAClearDebugLevel.l (added) * trunk/optimizer/src/pgapack/pgapack/man/manl/PGAClearDebugLevelByName.l (added) * trunk/optimizer/src/pgapack/pgapack/man/manl/PGADebugPrint.l (added) * trunk/optimizer/src/pgapack/pgapack/man/manl/PGASetDebugLevel.l (added) * trunk/optimizer/src/pgapack/pgapack/man/manl/PGASetDebugLevelByName.l (added) * trunk/optimizer/src/pgapack/pgapack/source (added) * trunk/optimizer/src/pgapack/pgapack/source/Makefile (added) * trunk/optimizer/src/pgapack/pgapack/source/Makefile.in (added) * trunk/optimizer/src/pgapack/pgapack/source/binary.c (added) * trunk/optimizer/src/pgapack/pgapack/source/char.c (added) * trunk/optimizer/src/pgapack/pgapack/source/cmdline.c (added) * trunk/optimizer/src/pgapack/pgapack/source/create.c (added) * trunk/optimizer/src/pgapack/pgapack/source/cross.c (added) * trunk/optimizer/src/pgapack/pgapack/source/debug.c (added) * trunk/optimizer/src/pgapack/pgapack/source/duplcate.c (added) * trunk/optimizer/src/pgapack/pgapack/source/evaluate.c (added) * trunk/optimizer/src/pgapack/pgapack/source/f2c.c (added) * trunk/optimizer/src/pgapack/pgapack/source/fitness.c (added) * trunk/optimizer/src/pgapack/pgapack/source/hamming.c (added) * trunk/optimizer/src/pgapack/pgapack/source/heap.c (added) * trunk/optimizer/src/pgapack/pgapack/source/integer.c (added) * trunk/optimizer/src/pgapack/pgapack/source/mpi_stub.c (added) * trunk/optimizer/src/pgapack/pgapack/source/mutation.c (added) * trunk/optimizer/src/pgapack/pgapack/source/parallel.c (added) * trunk/optimizer/src/pgapack/pgapack/source/pga.c (added) * trunk/optimizer/src/pgapack/pgapack/source/pop.c (added) * trunk/optimizer/src/pgapack/pgapack/source/random.c (added) * trunk/optimizer/src/pgapack/pgapack/source/real.c (added) * trunk/optimizer/src/pgapack/pgapack/source/report.c (added) * trunk/optimizer/src/pgapack/pgapack/source/restart.c (added) * trunk/optimizer/src/pgapack/pgapack/source/select.c (added) * trunk/optimizer/src/pgapack/pgapack/source/stop.c (added) * trunk/optimizer/src/pgapack/pgapack/source/system.c (added) * trunk/optimizer/src/pgapack/pgapack/source/user.c (added) * trunk/optimizer/src/pgapack/pgapack/source/utility.c (added) * trunk/optimizer/src/pgapack/pgapack/test (added) * trunk/optimizer/src/pgapack/pgapack/test/Makefile (added) * trunk/optimizer/src/pgapack/pgapack/test/Makefile.in (added) * trunk/optimizer/src/pgapack/pgapack/test/README (added) * trunk/optimizer/src/pgapack/pgapack/test/instverf (added) * trunk/optimizer/src/pgapack/pgapack/test/instverf.c (added) * trunk/optimizer/src/pgapack/pgapack/test/instverf.data (added) * trunk/optimizer/src/pgapack/pgapack/test/pgapackf.h (added) * trunk/optimizer/src/pgapack/pgapack/util (added) * trunk/optimizer/src/pgapack/pgapack/util/README (added) * trunk/optimizer/src/pgapack/pgapack/util/convertfortran.pl (added) * trunk/optimizer/src/pgapack/pgapack/util/upgrade_script.pl (added) * trunk/optimizer/src/pgapack/pgapack/util/wordsizes.c (added) Committing the newer version of PGAPack. Wed, 14 Nov 2007 19:06:25 GMT liveletlive [815] * trunk/optimizer/src/pgapack/gekco/pgapack (added) * trunk/optimizer/src/pgapack/gekco/pgapack/CHANGES (added) * trunk/optimizer/src/pgapack/gekco/pgapack/COPYRIGHT (added) * trunk/optimizer/src/pgapack/gekco/pgapack/INSTALL_gekco.txt (added) * trunk/optimizer/src/pgapack/gekco/pgapack/Makefile (added) * trunk/optimizer/src/pgapack/gekco/pgapack/Makefile.in (added) * trunk/optimizer/src/pgapack/gekco/pgapack/README (added) * trunk/optimizer/src/pgapack/gekco/pgapack/config.status (added) * trunk/optimizer/src/pgapack/gekco/pgapack/config_gekco (added) * trunk/optimizer/src/pgapack/gekco/pgapack/configure (added) * trunk/optimizer/src/pgapack/gekco/pgapack/configure.in (added) * trunk/optimizer/src/pgapack/gekco/pgapack/docs (added) * trunk/optimizer/src/pgapack/gekco/pgapack/docs/user_guide.ps (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/Makefile (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/Makefile.in (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/README (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/Makefile (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/Makefile.in (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/README (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/classic (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/classic.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/dejong (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/dejong.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/example (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/example.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/maxbit (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/maxbit.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/maxchar (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/maxchar.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/maxint (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/maxint.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/name (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/name.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/namefull (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/namefull.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/test.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/udtstr (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/c/udtstr.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/Makefile (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/Makefile.in (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/README (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/classic.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/dejong.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/example.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/maxbit.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/maxchar.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/maxint.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/mpif.h (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/name.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/namefull.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/fortran/pgapackf.h (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/Makefile (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/Makefile.in (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/README (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/grdfcn77.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/hesfcn77.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/mpif.h (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/objfcn77.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/pgapackf.h (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/ssqfcn77.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/ssqjac77.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/testprog.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/vecfcn77.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/mgh/vecjac77.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/templates (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/templates/README (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/templates/uf_native.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/templates/uf_native.f (added) * trunk/optimizer/src/pgapack/gekco/pgapack/examples/templates/uf_new.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/include (added) * trunk/optimizer/src/pgapack/gekco/pgapack/include/fakempi_h (added) * trunk/optimizer/src/pgapack/gekco/pgapack/include/fakempif_h (added) * trunk/optimizer/src/pgapack/gekco/pgapack/include/pgapack.h (added) * trunk/optimizer/src/pgapack/gekco/pgapack/include/pgapackf.h (added) * trunk/optimizer/src/pgapack/gekco/pgapack/junk (added) * trunk/optimizer/src/pgapack/gekco/pgapack/lib (added) * trunk/optimizer/src/pgapack/gekco/pgapack/lib/linux (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAEncodeIntegerAsBinary.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAEncodeIntegerAsGrayCode.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAEncodeRealAsBinary.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAEncodeRealAsGrayCode.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAEvaluate.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAFitness.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetBinaryAllele.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetCharacterAllele.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetEvaluation.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetEvaluationUpToDateFlag.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetFitness.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetFitnessCmaxValue.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetFitnessMinType.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetFitnessType.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetIntegerAllele.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetIntegerFromBinary.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetIntegerFromGrayCode.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetMaxFitnessRank.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetRealAllele.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetRealFromBinary.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGAGetRealFromGrayCode.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGARank.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGASetBinaryAllele.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGASetCharacterAllele.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGASetEvaluation.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGASetEvaluationUpToDateFlag.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGASetFitnessCmaxValue.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGASetFitnessMinType.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGASetFitnessType.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGASetIntegerAllele.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGASetMaxFitnessRank.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man1/PGASetRealAllele.1 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGAGetBinaryInitProb.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGAGetIntegerInitType.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGAGetMaxIntegerInitValue.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGAGetMaxRealInitValue.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGAGetMinIntegerInitValue.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGAGetMinRealInitValue.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGAGetRandomInitFlag.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGAGetRealInitType.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGASetBinaryInitProb.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGASetCharacterInitType.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGASetIntegerInitPermute.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGASetIntegerInitRange.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGASetRandomInitFlag.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGASetRealInitPercent.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man2/PGASetRealInitRange.2 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGACrossover.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetCrossoverProb.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetCrossoverType.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetMutationBoundedFlag.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetMutationIntegerValue.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetMutationProb.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetMutationRealValue.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetMutationType.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetPTournamentProb.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetRestartAlleleChangeProb.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetRestartFlag.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetRestartFrequencyValue.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetSelectType.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAGetUniformCrossoverProb.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGAMutate.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGARestart.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASelect.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASelectNextIndex.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetCrossoverProb.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetCrossoverType.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetMutationBoundedFlag.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetMutationIntegerValue.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetMutationProb.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetMutationRealValue.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetPTournamentProb.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetRestartAlleleChangeProb.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetRestartFlag.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetRestartFrequencyValue.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetSelectType.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man3/PGASetUniformCrossoverProb.3 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man4 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man4/PGABuildDatatype.4 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man4/PGAGetCommunicator.4 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man4/PGAGetNumProcs.4 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man4/PGAGetRank.4 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man4/PGAReceiveIndividual.4 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man4/PGASendIndividual.4 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man4/PGASendReceiveIndividual.4 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man4/PGASetCommunicator.4 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGACheckSum.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGAGetBestIndex.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGAGetRandomSeed.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGAGetWorstIndex.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGAHammingDistance.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGAMean.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGARandom01.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGARandomFlip.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGARandomGaussian.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGARandomInterval.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGARandomUniform.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGARound.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGASetRandomSeed.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man5/PGAStddev.5 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man6 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man6/PGAError.6 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man6/PGAGetMaxMachineDoubleValue.6 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man6/PGAGetMaxMachineIntValue.6 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man6/PGAGetMinMachineDoubleValue.6 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man6/PGAGetMinMachineIntValue.6 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man7 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man7/PGAGetPrintFrequencyValue.7 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man7/PGAPrintContextVariable.7 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man7/PGAPrintIndividual.7 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man7/PGAPrintPopulation.7 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man7/PGAPrintReport.7 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man7/PGAPrintString.7 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man7/PGASetPrintFrequencyValue.7 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man7/PGASetPrintOptions.7 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAChange.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGACheckStoppingConditions.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGACopyIndividual.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGACreate.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGADestroy.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGADone.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGADuplicate.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetDataType.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetGAIterValue.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetMaxGAIterValue.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetMutationAndCrossoverFlag.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetMutationOrCrossoverFlag.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetNoDuplicatesFlag.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetNumReplaceValue.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetOptDirFlag.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetPopReplaceType.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetPopSize.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetSortedPopIndex.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetStoppingRuleType.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAGetStringLength.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGARun.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGARunGM.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGARunMutationAndCrossover.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGARunMutationOrCrossover.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetMaxGAIterValue.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetMaxNoChangeValue.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetMaxSimilarityValue.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetMutationAndCrossoverFlag.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetMutationOrCrossoverFlag.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetNoDuplicatesFlag.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetNumReplaceValue.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetPopReplaceType.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetPopSize.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetStoppingRuleType.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetUp.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASetUserFunction.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGASortPop.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/man8/PGAUpdateGeneration.8 (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/mandesc (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/manl (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/manl/PGAClearDebugLevel.l (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/manl/PGAClearDebugLevelByName.l (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/manl/PGADebugPrint.l (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/manl/PGASetDebugLevel.l (added) * trunk/optimizer/src/pgapack/gekco/pgapack/man/manl/PGASetDebugLevelByName.l (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/Makefile (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/Makefile.in (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/binary.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/char.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/cmdline.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/create.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/cross.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/debug.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/duplcate.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/evaluate.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/f2c.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/fitness.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/hamming.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/heap.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/integer.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/mpi_stub.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/mutation.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/parallel.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/pga.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/pop.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/random.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/real.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/report.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/restart.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/select.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/stop.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/system.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/user.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/source/utility.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/test (added) * trunk/optimizer/src/pgapack/gekco/pgapack/test/Makefile (added) * trunk/optimizer/src/pgapack/gekco/pgapack/test/Makefile.in (added) * trunk/optimizer/src/pgapack/gekco/pgapack/test/README (added) * trunk/optimizer/src/pgapack/gekco/pgapack/test/instverf.c (added) * trunk/optimizer/src/pgapack/gekco/pgapack/test/instverf.data (added) * trunk/optimizer/src/pgapack/gekco/pgapack/test/mpif.h (added) * trunk/optimizer/src/pgapack/gekco/pgapack/test/pgapackf.h (added) * trunk/optimizer/src/pgapack/gekco/pgapack/util (added) * trunk/optimizer/src/pgapack/gekco/pgapack/util/README (added) * trunk/optimizer/src/pgapack/gekco/pgapack/util/convertfortran.pl (added) * trunk/optimizer/src/pgapack/gekco/pgapack/util/upgrade_script.pl (added) * trunk/optimizer/src/pgapack/gekco/pgapack/util/wordsizes.c (added) Committing the /tmp/gekco/pgapack folder that contains the older ... Wed, 14 Nov 2007 19:04:37 GMT liveletlive [814] * trunk/optimizer/src/pgapack/gekco (added) Committing the /tmp/gekco/pgapack folder that contains the older ... Wed, 14 Nov 2007 18:29:26 GMT liveletlive [813] * trunk/optimizer/src/pgapack (moved) renaming the folder Wed, 14 Nov 2007 18:23:39 GMT liveletlive [812] * trunk/optimizer/src/PGAPack_gekco (added) This is the folder meant to be for Prof. Klimeck's modified version ... Fri, 09 Nov 2007 21:05:05 GMT gah [811] * trunk/gui/scripts/curve.tcl (modified) * trunk/gui/scripts/histogram.tcl (added) * trunk/gui/scripts/historesult.tcl (added) introduction of histogram object Wed, 07 Nov 2007 22:35:17 GMT vrinside [810] * trunk/vizservers/nanovis/nanovis.cpp (modified) * trunk/vizservers/nanovis/shaders/one_volume.cg (modified) one_volume.cg -> modified ambient value 0.8 to 0.2 nanovis.cpp -> ... Fri, 02 Nov 2007 15:23:19 GMT mmc [809] * trunk/optimizer (added) * trunk/optimizer/src (added) * trunk/optimizer/src/Makefile (added) * trunk/optimizer/src/rp_optimizer.c (added) * trunk/optimizer/src/rp_optimizer.h (added) * trunk/optimizer/src/test.c (added) * trunk/optimizer/tests (added) Created the initial API for the optimizer. Type "make" in this ... Mon, 29 Oct 2007 20:16:24 GMT dkearney [808] * trunk/python/Rappture/PyRpLibrary.cc (modified) * trunk/src/core/RpLibrary.cc (modified) allow the user to create a new empty rappture library object in c++ ... Tue, 02 Oct 2007 20:43:47 GMT dkearney [807] * trunk/gui/apps/nanovis-test (modified) adjusted nanovis-test to always send gzip mime encoded data to ... Tue, 02 Oct 2007 18:53:48 GMT vrinside [806] * trunk/vizservers/nanovis/NvZincBlendeReconstructor.cpp (modified) * trunk/vizservers/nanovis/nanovis.cpp (modified) Add a macro for dubugging Wed, 26 Sep 2007 09:43:43 GMT dkearney [805] * trunk/gui/apps/nanovis-test (modified) removed old code to shell out and compress/encode file and replaced ... Mon, 24 Sep 2007 17:19:06 GMT vrinside [804] * trunk/vizservers/nanovis/NvZincBlendeReconstructor.cpp (modified) * trunk/vizservers/nanovis/NvZincBlendeReconstructor.h (modified) * trunk/vizservers/nanovis/nanovis.cpp (modified) Tue, 18 Sep 2007 15:16:10 GMT vrinside [803] * trunk/vizservers/nanovis/shaders/zincblende_volume.cg (modified) Mon, 17 Sep 2007 04:34:48 GMT vrinside [802] * trunk/vizservers/nanovis/ZincBlendeVolume.cpp (modified) Fixed double memory deletion Mon, 17 Sep 2007 01:38:47 GMT vrinside [801] * trunk/vizservers/nanovis/shaders/zincblende_volume.cg (modified) Modified a routine for compute texture coordinate. Data decompose ... Mon, 27 Aug 2007 15:18:14 GMT vrinside [800] * trunk/vizservers/nanovis/NvZincBlendeReconstructor.cpp (modified) * trunk/vizservers/nanovis/NvZincBlendeReconstructor.h (modified) Add data loader for newly defined zinc blende structure Mon, 27 Aug 2007 15:14:05 GMT vrinside [799] * trunk/vizservers/nanovis/Volume.h (modified) * trunk/vizservers/nanovis/VolumeRenderer.h (modified) * trunk/vizservers/nanovis/ZincBlendeVolume.h (modified) * trunk/vizservers/nanovis/nanovis.cpp (modified) remove a statement 'using namespace std;' in order to avoid a ... Wed, 08 Aug 2007 02:54:51 GMT mmc [798] * trunk/examples/app-fermi/wrapper/python (added) * trunk/examples/app-fermi/wrapper/python/fermi.m (added) * trunk/examples/app-fermi/wrapper/python/fermi.py (added) * trunk/examples/app-fermi/wrapper/python/tool.xml (added) Added an example of a python wrapper script. Mon, 06 Aug 2007 01:42:58 GMT mmc [797] * trunk/examples/canvas/tool.xml (modified) * trunk/examples/canvas/waveln.tcl (modified) Fixed the canvas example so that it can be launched with tclsh and ... Sat, 04 Aug 2007 20:40:34 GMT mmc [796] * trunk/examples/canvas (added) * trunk/examples/canvas/hand.gif (added) * trunk/examples/canvas/tool.xml (added) * trunk/examples/canvas/waveln.tcl (added) Added an example of the Tk canvas producing diagrams. Fri, 03 Aug 2007 12:10:40 GMT dkearney [795] * trunk/gui/apps/simsim.py (deleted) * trunk/python/Rappture/PyRpLibrary.cc (modified) updated python bindings to not complain about giving an empty value ... Thu, 02 Aug 2007 15:08:38 GMT mmc [794] * trunk/examples/zoo/note (added) * trunk/examples/zoo/note/docs (added) * trunk/examples/zoo/note/docs/bysize.gif (added) * trunk/examples/zoo/note/docs/bysize.html (added) * trunk/examples/zoo/note/note.tcl (added) * trunk/examples/zoo/note/tool.xml (added) Added an example of elements. Wed, 01 Aug 2007 01:55:06 GMT mmc [793] * trunk/examples/app-fermi/cee/original.c (added) Added original version of fermi.c program (before Rappture conversion) Wed, 01 Aug 2007 00:30:57 GMT mmc [792] * trunk/examples/app-fermi/fortran/fermi.f (modified) This example had "K" for both units conversions, so the Ef conversion ... Tue, 31 Jul 2007 01:40:27 GMT dkearney [791] * trunk/python/Rappture/PyRpLibrary.cc (moved) * trunk/python/setup.py.in (modified) renamed the python rappture library source file Tue, 31 Jul 2007 01:36:25 GMT dkearney [790] * trunk/python/Rappture/Library.cc (modified) * trunk/python/Rappture/__init__.py (modified) * trunk/python/Rappture/unittest_library.py (modified) * trunk/python/setup.py.in (modified) changed the name of the python !Library module to library Mon, 30 Jul 2007 17:10:00 GMT dkearney [789] * trunk/src/cee/RpLibraryCInterface.cc (modified) * trunk/src/fortran/RpLibraryFInterface.cc (modified) * trunk/src/matlab/rpLibResult.cc (modified) * trunk/src/octave/rpLibResult.cc (modified) adding tool.version.rappture.language to xml files to keep track of ... Mon, 30 Jul 2007 17:08:29 GMT dkearney [788] * trunk/src/core/RpEntityRef.cc (modified) * trunk/src/core/RpEntityRef.h (modified) * trunk/src/core/RpLibrary.cc (modified) adjustments to entity references encoding to include the length of ... Fri, 27 Jul 2007 06:16:30 GMT dkearney [787] * trunk/python/Rappture/Library.cc (added) * trunk/python/Rappture/__init__.py (modified) * trunk/python/Rappture/result.py (modified) * trunk/python/Rappture/test.xml (added) * trunk/python/Rappture/unittest_library.py (added) * trunk/python/setup.py.in (modified) adding new !Library.cc which replaces library.py and result.py as ... Thu, 19 Jul 2007 14:39:57 GMT mmc [786] * trunk/gui/scripts/controls.tcl (modified) Fixed the layout of groups/notes so that largest elements on the page ... Thu, 19 Jul 2007 12:21:51 GMT mmc [785] * trunk/gui/scripts/htmlviewer.tcl (modified) * trunk/gui/scripts/image.tcl (modified) * trunk/gui/scripts/imageresult.tcl (modified) * trunk/gui/scripts/note.tcl (modified) * trunk/gui/scripts/panes.tcl (modified) Added support for a on the output side of an object. ... Thu, 19 Jul 2007 12:20:46 GMT mmc [784] * trunk/tcl/scripts/library.tcl (modified) Added support for experimental object. Thu, 19 Jul 2007 12:20:11 GMT mmc [783] * trunk/gui/scripts/nanovisviewer.tcl (modified) Fix for ticket #3169 (error writing "sock66": connection reset by ... Sat, 14 Jul 2007 01:44:44 GMT mmc [782] * trunk/gui/scripts/controls.tcl (modified) * trunk/gui/scripts/deviceViewer1D.tcl (modified) Fixed the layout of controls so that large items like and ... Wed, 11 Jul 2007 20:34:29 GMT mmc [781] * trunk/gui/scripts/controlOwner.tcl (modified) * trunk/gui/scripts/drawing.tcl (added) * trunk/gui/scripts/drawingentry.tcl (added) * trunk/gui/scripts/page.tcl (modified) Rough version of a drawing element that can be used for diagrams. Tue, 10 Jul 2007 14:55:13 GMT vrinside [780] * trunk/vizservers/nanovis/ContourLineFilter.cpp (modified) * trunk/vizservers/nanovis/HeightMap.cpp (modified) * trunk/vizservers/nanovis/HeightMap.h (modified) * trunk/vizservers/nanovis/R2/src/R2Geometry.cpp (modified) * trunk/vizservers/nanovis/nanovis.cpp (modified) Add changing the color of linecontour Tue, 10 Jul 2007 01:38:11 GMT vrinside [779] * trunk/vizservers/nanovis/HeightMap.cpp (modified) * trunk/vizservers/nanovis/nanovis.cpp (modified) modified controlling visibility of linecontour of heightmap Tue, 10 Jul 2007 00:48:28 GMT vrinside [778] * trunk/vizservers/nanovis/nanovis.cpp (modified) modified axis and grid visible command Tue, 10 Jul 2007 00:14:09 GMT vrinside [777] * trunk/vizservers/nanovis/NvZincBlendeReconstructor.cpp (modified) modified creation of zincblende volume Mon, 09 Jul 2007 23:55:19 GMT vrinside [776] * trunk/vizservers/nanovis/ContourLineFilter.cpp (added) * trunk/vizservers/nanovis/ContourLineFilter.h (added) * trunk/vizservers/nanovis/Grid.cpp (added) * trunk/vizservers/nanovis/Grid.h (added) * trunk/vizservers/nanovis/HeightMap.cpp (added) * trunk/vizservers/nanovis/HeightMap.h (added) * trunk/vizservers/nanovis/Makefile.in (modified) * trunk/vizservers/nanovis/Nv.cpp (modified) * trunk/vizservers/nanovis/NvShader.cpp (modified) * trunk/vizservers/nanovis/NvShader.h (modified) * trunk/vizservers/nanovis/R2/include/R2/graphics (added) * trunk/vizservers/nanovis/R2/include/R2/graphics/R2Geometry.h (added) * trunk/vizservers/nanovis/R2/include/R2/graphics/R2IndexBuffer.h (added) * trunk/vizservers/nanovis/R2/include/R2/graphics/R2VertexBuffer.h (added) * trunk/vizservers/nanovis/R2/src/R2Geometry.cpp (added) * trunk/vizservers/nanovis/R2/src/R2IndexBuffer.cpp (added) * trunk/vizservers/nanovis/R2/src/R2VertexBuffer.cpp (added) * trunk/vizservers/nanovis/TransferFunction.h (modified) * trunk/vizservers/nanovis/TypeDefs.h (added) * trunk/vizservers/nanovis/Volume.cpp (modified) * trunk/vizservers/nanovis/Volume.h (modified) * trunk/vizservers/nanovis/ZincBlendeVolume.cpp (modified) * trunk/vizservers/nanovis/ZincBlendeVolume.h (modified) * trunk/vizservers/nanovis/nanovis.cpp (modified) * trunk/vizservers/nanovis/shaders/heightcolor.cg (added) * trunk/vizservers/nanovis/shaders/one_volume.cg (modified) Add 3D surface plot and grid rendering Mon, 09 Jul 2007 19:41:26 GMT dkearney [775] * trunk/gui/scripts/tool.tcl (modified) removed the hard coded path to submit per steve's request. now, on ... Mon, 09 Jul 2007 15:54:12 GMT mmc [774] * trunk/gui/scripts/textresult.tcl (modified) Downloading of binary data within objects was broken because ... Fri, 15 Jun 2007 02:27:40 GMT mmc [773] * trunk/gui/scripts/htmlviewer.tcl (modified) Fixed the default font size used in the HTML viewer for objects. Fri, 15 Jun 2007 01:55:08 GMT mmc [772] * trunk/gui/scripts/images/ballnstick.gif (modified) * trunk/gui/scripts/images/lines.gif (modified) * trunk/gui/scripts/images/rocker.xbm (added) * trunk/gui/scripts/images/spheres.gif (modified) * trunk/gui/scripts/molvisviewer.tcl (modified) Fixed up the rendering controls for the MolvisViewer. Thu, 14 Jun 2007 21:27:40 GMT dkearney [771] * trunk/gui/apps/rappture.env.in (modified) adding the : back to the OCTAVE_PATH environment variable because it ... Wed, 13 Jun 2007 16:15:38 GMT nkissebe [770] * trunk/gui/scripts/deviceEditor.tcl (modified) * trunk/gui/scripts/molvisviewer.tcl (modified) rename resource variable to look for to molvis_server instead of ... Mon, 11 Jun 2007 06:09:09 GMT dkearney [769] * trunk/src/core/RpLibrary.cc (modified) updated result function for all language bindings to automatically ... Mon, 11 Jun 2007 00:56:34 GMT mmc [768] * trunk/gui/scripts/analyzer.tcl (modified) * trunk/gui/scripts/numberresult.tcl (modified) * trunk/gui/scripts/xyresult.tcl (modified) Added manual-resim directive. This allows you to ... Sun, 10 Jun 2007 23:21:42 GMT mmc [767] * trunk/gui/scripts/contourresult.tcl (modified) * trunk/gui/scripts/deviceViewer1D.tcl (modified) * trunk/gui/scripts/deviceresult.tcl (modified) * trunk/gui/scripts/imageresult.tcl (modified) * trunk/gui/scripts/meshresult.tcl (modified) * trunk/gui/scripts/moleculeViewer.tcl (modified) * trunk/gui/scripts/molvisviewer.tcl (modified) * trunk/gui/scripts/nanovisviewer.tcl (modified) * trunk/gui/scripts/sequenceresult.tcl (modified) * trunk/gui/scripts/textresult.tcl (modified) * trunk/gui/scripts/valueresult.tcl (modified) * trunk/gui/scripts/xyresult.tcl (modified) Oops! Forgot to add the new -param option emitted by the ResultSet, ... Sun, 10 Jun 2007 23:06:35 GMT mmc [766] * trunk/examples/zoo/number/number.tcl (modified) * trunk/gui/scripts/contourresult.tcl (modified) * trunk/gui/scripts/deviceEditor.tcl (modified) * trunk/gui/scripts/deviceViewer1D.tcl (modified) * trunk/gui/scripts/deviceresult.tcl (modified) * trunk/gui/scripts/energyLevels.tcl (modified) * trunk/gui/scripts/field3dresult.tcl (modified) * trunk/gui/scripts/imageresult.tcl (modified) * trunk/gui/scripts/meshresult.tcl (modified) * trunk/gui/scripts/moleculeViewer.tcl (modified) * trunk/gui/scripts/molvisviewer.tcl (modified) * trunk/gui/scripts/nanovisviewer.tcl (modified) * trunk/gui/scripts/numberresult.tcl (added) * trunk/gui/scripts/resultset.tcl (modified) * trunk/gui/scripts/resultviewer.tcl (modified) * trunk/gui/scripts/sequenceresult.tcl (modified) * trunk/gui/scripts/textresult.tcl (modified) * trunk/gui/scripts/valueresult.tcl (modified) * trunk/gui/scripts/xyresult.tcl (modified) * trunk/tcl/scripts/result.tcl (modified) Fixed the output viewer for numbers/integers to show a plot of the ... Sat, 09 Jun 2007 22:01:25 GMT dkearney [765] * trunk/tcl/scripts/exec.tcl (modified) added SIGTERM as the kill signal for rappture exec at steve's request Sat, 09 Jun 2007 21:12:34 GMT mmc [764] * trunk/gui/scripts/resultset.tcl (modified) Fix for support ticket #1607 (can't set _cntlInfo(...)) This ticket ... Sat, 09 Jun 2007 19:09:16 GMT mmc [763] * trunk/tcl/scripts/library.tcl (modified) Fix for support ticket #2273 (can't read "val": no such variable). Sat, 09 Jun 2007 01:04:01 GMT dkearney [762] * trunk/src/Makefile.in (modified) * trunk/src2/core/Makefile.in (modified) removed rpath from linking to make sure /apps is not mounted on ... Sat, 09 Jun 2007 00:16:22 GMT mmc [761] * trunk/gui/scripts/controlOwner.tcl (modified) * trunk/gui/scripts/controls.tcl (modified) * trunk/gui/scripts/energyLevels.tcl (modified) * trunk/gui/scripts/htmlviewer.tcl (added) * trunk/gui/scripts/note.tcl (added) * trunk/gui/scripts/valueresult.tcl (modified) Added a new object which can be used to add annotations to ... Fri, 08 Jun 2007 22:46:18 GMT dkearney [760] * trunk/vizservers/configure.in (modified) * trunk/vizservers/pymolproxy/Makefile.in (modified) * trunk/vizservers/pymolproxy/pymol (added) * trunk/vizservers/start_viz.sh.in (modified) added pymol script for launching pymol. updated pymolproxy's ... Fri, 08 Jun 2007 20:48:39 GMT dkearney [759] * trunk/src/core/RpLibrary.cc (modified) * trunk/src/core/RpLibrary.h (modified) fixes for the copy function within the core rappture library. this ... Sun, 03 Jun 2007 03:15:26 GMT dkearney [758] * trunk/src/core/RpLibrary.cc (modified) * trunk/src/core/RpLibrary.h (modified) added safety check to result() fxn to report failure to write run.xml ... Thu, 31 May 2007 21:45:54 GMT dkearney [757] * trunk/vizservers/start_viz.sh.in (modified) simplified start_vis to just copy the whole install_dir tree to /tmp ... Thu, 31 May 2007 19:46:34 GMT dkearney [756] * trunk/vizservers/start_viz.sh.in (modified) adding -r flag to cp so it does a recursive copy Thu, 31 May 2007 18:22:53 GMT dkearney [755] * trunk/vizservers/nanovis/Lic.cpp (modified) * trunk/vizservers/nanovis/Nv.cpp (modified) * trunk/vizservers/nanovis/Nv.h (modified) * trunk/vizservers/nanovis/NvColorTableShader.cpp (modified) * trunk/vizservers/nanovis/NvLIC.cpp (modified) * trunk/vizservers/nanovis/NvParticleAdvectionShader.cpp (modified) * trunk/vizservers/nanovis/NvParticleRenderer.cpp (modified) * trunk/vizservers/nanovis/NvRegularVolumeShader.cpp (modified) * trunk/vizservers/nanovis/ParticleSystem.cpp (modified) * trunk/vizservers/nanovis/PlaneRenderer.cpp (modified) * trunk/vizservers/nanovis/nanovis.cpp (modified) * trunk/vizservers/start_viz.sh.in (modified) added -p option to nanovis so we can add paths in a colon separated ... Wed, 30 May 2007 19:10:06 GMT dkearney [754] * trunk/vizservers/start_viz.sh.in (modified) moved binary programs to the bin directory in start_viz.sh script Wed, 30 May 2007 08:23:18 GMT dkearney [753] * trunk/vizservers/start_viz.sh.in (modified) updated start server script for nanovis/nanoscale changing the port ... Wed, 30 May 2007 07:19:11 GMT dkearney [752] * trunk/gui/scripts/field.tcl (modified) * trunk/src2/core/RpEncode.cc (modified) * trunk/tcl/scripts/library.tcl (modified) * trunk/vizservers/nanovis/nanovis.cpp (modified) added use of RPENC_HDR flag in decode function so users can give the ... Tue, 29 May 2007 04:10:04 GMT dkearney [751] * trunk/gui/configure (modified) * trunk/gui/configure.in (modified) * trunk/src/Makefile.in (modified) * trunk/src2/core/Makefile.in (modified) * trunk/src2/core/RpEncode.cc (moved) * trunk/src2/core/RpEncode.h (moved) * trunk/vizservers/configure (modified) * trunk/vizservers/configure.in (modified) moved encode code to src2/core so it can be used in librappture2 for ... Mon, 28 May 2007 19:24:28 GMT dkearney [750] * trunk/vizservers/Makefile.in (modified) * trunk/vizservers/nanoscale/Makefile (deleted) * trunk/vizservers/nanoscale/Makefile.in (modified) * trunk/vizservers/nanovis/Makefile (deleted) * trunk/vizservers/nanovis/Makefile.in (modified) * trunk/vizservers/nanovis/start_server (deleted) * trunk/vizservers/pymolproxy/Makefile (deleted) * trunk/vizservers/pymolproxy/Makefile.in (modified) * trunk/vizservers/start_viz.sh (deleted) added distclean targets Mon, 28 May 2007 18:45:31 GMT dkearney [749] * trunk/vizservers (moved) * trunk/vizservers/Makefile.in (added) * trunk/vizservers/configure (added) * trunk/vizservers/configure.in (added) * trunk/vizservers/nanoscale (copied) * trunk/vizservers/nanoscale/Makefile (modified) * trunk/vizservers/nanoscale/Makefile.in (added) * trunk/vizservers/nanovis (copied) * trunk/vizservers/nanovis/Makefile (modified) * trunk/vizservers/nanovis/Makefile.in (added) * trunk/vizservers/nanovis/start_server (modified) * trunk/vizservers/pymolproxy (copied) * trunk/vizservers/pymolproxy/Makefile (modified) * trunk/vizservers/pymolproxy/Makefile.in (added) * trunk/vizservers/start_viz.sh (copied) * trunk/vizservers/start_viz.sh.in (added) moved vizservers directory to top level. added configure/makefiles to ... Wed, 23 May 2007 23:16:47 GMT dkearney [748] * trunk/src/Makefile.in (modified) fixed librappture.a to properly include object files from src2/core Wed, 23 May 2007 20:41:01 GMT dkearney [747] * trunk/src/core/RpUnits.cc (modified) added decibel to list of recognized units. Fri, 18 May 2007 22:28:20 GMT mmc [746] * trunk/gui/scripts/combobox.tcl (modified) * trunk/gui/scripts/loader.tcl (modified) * trunk/gui/scripts/spinint.tcl (modified) Fix for support ticket #1773 "bad window path name ".main.area..." ... Fri, 18 May 2007 18:55:33 GMT mmc [745] * trunk/gui/scripts/analyzer.tcl (modified) Fix for a problem loading structures that showed up in the MOSFET ... Fri, 18 May 2007 14:03:10 GMT dkearney [744] * trunk/gui/apps/rappture.env.in (modified) added lib/vtk to lib search path so rappture can find vtk libraries, ... Thu, 17 May 2007 20:57:06 GMT mmc [743] * trunk/gui/scripts/bugreport.tcl (modified) * trunk/test/jobs (added) * trunk/test/jobs/coredumps (added) * trunk/test/jobs/coredumps/coredump.tcl (added) * trunk/test/jobs/coredumps/genoutput.tcl (added) * trunk/test/jobs/coredumps/tool.xml (added) Added a test so we can simulate jobs that dump core mid-way through. ... Thu, 17 May 2007 15:12:25 GMT mmc [742] * trunk/gui/scripts/deviceViewer1D.tcl (modified) Fix for problem viewing structures in app-mgnanowirefet. The icon on ... Thu, 17 May 2007 03:33:19 GMT nkissebe [741] * trunk/t.txt (deleted) completeing repository check after conversion to fsfs Thu, 17 May 2007 03:32:49 GMT nkissebe [740] * trunk/t.txt (added) testing repository after conversion to fsfs Thu, 17 May 2007 02:52:40 GMT mmc [739] * trunk/gui/scripts/contourresult.tcl (modified) Fix for support ticket #1686 'can't read "_limits(vmin)": no such ... Thu, 17 May 2007 02:37:45 GMT mmc [738] * trunk/gui/scripts/deviceViewer1D.tcl (modified) * trunk/gui/scripts/energyLevels.tcl (modified) * trunk/gui/scripts/field.tcl (modified) * trunk/gui/scripts/gauge.tcl (modified) * trunk/gui/scripts/xyresult.tcl (modified) Fixed a problem recently introduced with device structures on the ... Wed, 16 May 2007 20:27:15 GMT dkearney [737] * trunk/src/matlab/RpMatlabInterface.cc (modified) * trunk/src/matlab/RpMatlabInterface.h (modified) * trunk/src/matlab/rpUtilsProgress.cc (modified) added the rpmxFlush function to flush matlab's buffers on demand. ... Tue, 15 May 2007 06:44:47 GMT dkearney [736] * trunk/gui/scripts/curve.tcl (modified) * trunk/gui/scripts/resultviewer.tcl (modified) * trunk/gui/scripts/xyresult.tcl (modified) adding capabilities for xy scatter plots by adding curve.about.type = ... Sun, 13 May 2007 02:18:44 GMT mmc [735] * trunk/gui/scripts/tool.tcl (modified) Oops! The "submit" command isn't on the user's path right now. ... Sun, 13 May 2007 02:12:48 GMT mmc [734] * trunk/gui/scripts/tool.tcl (modified) Fixed the handling for "job_protocol=submit" so that it doesn't print ... Sun, 13 May 2007 00:53:51 GMT mmc [733] * trunk/gui/scripts/analyzer.tcl (modified) * trunk/gui/scripts/bugreport.tcl (modified) Fixed long messages (usually resulting from "Problem launching job") ... Sat, 12 May 2007 22:39:48 GMT mmc [732] * trunk/gui/scripts/field.tcl (modified) Oops! Goofed up the "string is double" test when adding -strict. Sat, 12 May 2007 22:33:40 GMT mmc [731] * trunk/gui/scripts/tool.tcl (modified) Fixed tool execution to honor the new "job_protocol" directive. If ... Sat, 12 May 2007 22:07:26 GMT mmc [730] * trunk/gui/scripts/field.tcl (modified) * trunk/gui/scripts/gauge.tcl (modified) * trunk/gui/scripts/moleculeViewer.tcl (modified) Fix for support ticket #1434 "reset zoom button does not work on ... Sat, 12 May 2007 21:14:49 GMT mmc [729] * trunk/examples/zoo/structure/structure.tcl (modified) * trunk/gui/scripts/deviceViewer1D.tcl (modified) * trunk/gui/scripts/field.tcl (modified) Fix for support ticket #1455, "floating-point value too large to ... Fri, 11 May 2007 20:06:36 GMT mmc [728] * trunk/gui/apps/driver (modified) * trunk/gui/scripts/analyzer.tcl (modified) * trunk/gui/scripts/bugreport.tcl (modified) Fixed the automatic bug reporting system to avoid reporting bugs ... Fri, 11 May 2007 18:31:34 GMT mmc [727] * trunk/gui/scripts/bugreport.tcl (modified) Final tweaks to improve the messages for automatic ticket submission ... Fri, 11 May 2007 17:28:42 GMT mmc [726] * trunk/gui/scripts/tool.tcl (modified) Added a fix so that tools running without a $SESSIONDIR/resources ... Fri, 11 May 2007 03:00:44 GMT mmc [725] * trunk/src/core/RpEncode.cc (modified) * trunk/src/tcl/src/RpEncodeTclInterface.cc (modified) * trunk/src/tcl/tests/encode.test (modified) Fixed the Rappture::encoding::is function to properly detect embedded ... Fri, 11 May 2007 02:53:32 GMT mmc [724] * trunk/gui/Makefile.in (modified) * trunk/gui/configure (modified) * trunk/gui/configure.in (modified) * trunk/gui/scripts/analyzer.tcl (modified) * trunk/gui/scripts/animicon.tcl (added) * trunk/gui/scripts/bugreport.tcl (modified) * trunk/gui/scripts/images/circle-ball1.gif (added) * trunk/gui/scripts/images/circle-ball2.gif (added) * trunk/gui/scripts/images/circle-ball3.gif (added) * trunk/gui/scripts/images/circle-ball4.gif (added) * trunk/gui/scripts/images/circle-ball5.gif (added) * trunk/gui/scripts/images/circle-ball6.gif (added) * trunk/gui/scripts/images/circle-ball7.gif (added) * trunk/gui/scripts/images/circle-ball8.gif (added) * trunk/gui/scripts/loader.tcl (modified) * trunk/gui/scripts/textentry.tcl (modified) * trunk/gui/scripts/tool.tcl (modified) Fixed the bugreport component to automatically register all "Oops!" ... Thu, 10 May 2007 21:39:45 GMT nkissebe [723] * trunk/gui/vizservers/pymolproxy/Makefile (modified) fix install dir for pymolproxy Thu, 10 May 2007 21:32:13 GMT nkissebe [722] * trunk/gui/vizservers/nanoscale/server.c (modified) leave read end of request pipe open when launching client to prevent ... Thu, 10 May 2007 21:29:26 GMT nkissebe [721] * trunk/gui/vizservers/pymolproxy/pymolproxy.c (modified) ignore SIGPIPE signal (ie, if nanoscale terminated) Thu, 10 May 2007 21:28:20 GMT nkissebe [720] * trunk/gui/vizservers/nanovis/nanovis.cpp (modified) ignore SIGPIPE signals (which would occur if nanoscale terminated) Wed, 09 May 2007 23:48:53 GMT dkearney [719] * trunk/Makefile.in (modified) * trunk/configure (modified) * trunk/configure.in (modified) * trunk/include (added) adding include directory and adjusting build system's matlab arch ... Wed, 09 May 2007 20:48:39 GMT dkearney [718] * trunk/Makefile.in (modified) * trunk/configure (modified) * trunk/configure.in (modified) * trunk/perl/Makefile.PL.in (modified) * trunk/python/setup.py.in (modified) * trunk/src/Makefile.in (modified) * trunk/src/matlab/Makefile.in (modified) * trunk/src/matlab/RpMatlabInterface.h (modified) * trunk/src/octave/Makefile.in (modified) * trunk/src/octave/RpOctaveInterface.h (modified) * trunk/src/tcl/configure (modified) * trunk/src/tcl/configure.in (modified) * trunk/src2/core/Makefile.in (modified) after the core rappture library (librappture.so) is created the ... Wed, 09 May 2007 15:58:58 GMT nkissebe [717] * trunk/gui/vizservers/nanoscale/Makefile (modified) build binary as "nanoscale" rather than "server". changed install dir ...