Introduction to Molecular Dynamics Showcase
13 Feb 2017 | Downloads | Contributor(s): Chen-Yu Li, Karl Steven Decker (editor), Aleksei Aksimentiev
In this tutorial, we will demonstrate how to use the MD showcase builder tool to create a showcase. We will start from the simplest example – creating a showcase from a PDB file – and move on to more complicated examples. We will also cover how to add a description, change...
cadnano to PDB File Converter
13 Nov 2013 | Tools | Contributor(s): Jejoong Yoo, AbderRahman N Sobh, Chen-Yu Li, Aleksei Aksimentiev
Accepts CadNano files in the form of *.json and outputs a file in *.pdb which can be read by programs such as VMD.
Functionalization Workbench
30 Aug 2013 | Tools | Contributor(s): AbderRahman N Sobh, Chen-Yu Li, Nahil Sobh, Aleksei Aksimentiev
Using molecular dynamic simulation - explore the interactions between a molecular structure and substrate when they are linked together.
Molecular Dynamics Showcase
06 Jul 2013 | Tools | Contributor(s): Michael McLennan, Chen-Yu Li, john stone, Aleksei Aksimentiev, George A. Howlett
View interesting features of a molecular dynamics trajectory file
[Illinois] BioNanotechnology Summer Institute 2015
09 Nov 2015 | Workshops | Contributor(s): Aleksei Aksimentiev, Rashid Bashir, Richard Chadwick, Brian Cunningham, Amy Herr, Joseph M K Irudayaraj, Hyun Joon Kong, Ting Lu, Marina Marjanovic, Cathy Murphy, Shuming Nie, Scott Siechen, Ivan Smalyukh
Twenty-six students, postdocs, and junior faculty from science and engineering disciplines from across the campus, the country, and overseas participated in the 2015 University of Illinois BioNanotechnology Summer Institute from July 27-August 7 at the Micro + Nanotechnology Lab, learning about...
Top 5 shown | See more results