Souffle: Virus Capsid Assembly Lab

By Nilsson, Lauren¹; JCS Kadupitiya¹; Vikram Jadhao¹

1. Indiana University

Simulate assembly of flexible capsomeres into virus capsids and oligomers

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Version 1.0 - published on 01 Apr 2020

doi:10.21981/Q6AW-AB86 cite this

Open source: license | download

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Usage

World usage

Location of all "Souffle: Virus Capsid Assembly Lab" Users Since Its Posting

• Monthly
• Yearly
• Cumulative

Cumulative Simulation Users

38

10 10 13 13 13 13 13 15 16 16 16 17 17 17 17 19 19 19 19 20 22 23 23 24 24 25 29 30 31 31 31 32 32 32 32 32 32 32 34 34 34 35 36 37 38 38 38 38 38

Simulation Runs

199 Mar 2024

38 40 58 64 74 77 83 92 100 106 112 115 118 118 118 129 129 129 129 136 142 144 147 155 157 160 172 174 177 177 177 180 180 180 182 182 182 182 187 187 187 190 194 197 199 199 199 199 199

Overview

	Average	Total
Wall Clock Time	9.32 hours	27.17 days
CPU time	7.96 hours	23.21 days
Interaction Time	8.41 hours	24.53 days