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Finitely Buffered Optimal State Space Enumeration and Discrete Chemical Master Equation Solution

By Youfang Cao1, Anna Terebus, John Feser2

1. University of Illinois at Chicago 2. University of Illinois at Urbana-Champaign

Solves dCME by optimal enumeration of finitely buffered state space.

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Version 1.1 - published on 20 Aug 2013

doi:10.4231/D33J39159 cite this

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Researchers should cite this work as follows:

  • Cao, Y., & Liang, J. (2008). Optimal enumeration of state space of finitely buffered stochastic molecular networks and exact computation of steady state landscape probability. BMC Systems Biology, 2(1), 30. Cao, Y., Lu, H. M., & Liang, J. (2010). Probability landscape of heritable and robust epigenetic state of lysogeny in phage lambda. Proceedings of the National Academy of Sciences, 107(43), 18445-18450.
  • Youfang Cao; Anna Terebus; John Feser (2013), "Finitely Buffered Optimal State Space Enumeration and Discrete Chemical Master Equation Solution," https://nanohub.org/resources/fbsdcme. (DOI: 10.4231/D33J39159).

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