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4.5 out of 5 stars
14 Mar 2008 | Tools | Contributor(s): Reza Toghraee, Umberto Ravaioli
Ion channel simulator
4.0 out of 5 stars
14 Feb 2008 | Tools | Contributor(s): David Papke, Reza Toghraee, Umberto Ravaioli, Ankit Raj
Simulates ion flow through a channel.
0.0 out of 5 stars
20 Jan 2010 | Tools | Contributor(s): Yang Zhao, Albert Liao, Eric Pop
Simulate field effect carrier mobility in back-gated CNTFET devices at low field
Finite Buffer dCME (fb-dCME)
20 Jun 2013 | Tools | Contributor(s): Youfang Cao, Anna Terebus, John Feser, Jie Liang, Nahil Sobh
Finite Buffer Method for Direct Solution of Discrete Chemical Master Equation (fb-dCME)
Illinois Tools: Basic Bulk Silicon Transport Data at 300K
24 Nov 2009 | Tools | Contributor(s): Kyeong-hyun Park, Mohamed Mohamed, Nahil Sobh
Calculations of doped bulk silicon transport data
Illinois Tools: NanoGromacs
29 Feb 2008 | Tools | Contributor(s): Dairui Chen, Derrick Kearney, Jay Mashl, Nahil Sobh, Eric Jakobsson
Implementation of the popular molecular dynamics software suite GROMACS
Illinois Tools: NanoGromacsDemo
08 Sep 2008 | Tools | Contributor(s): Dairui Chen, Derrick Kearney, Jay Mashl, Nahil Sobh, Eric Jakobsson
22 May 2009 | Tools | Contributor(s): Raheem Syed, Nahil Sobh, Umberto Ravaioli, Gabriel Popescu, Mohamed Mohamed
It can display, edit, analyze, process, save and print 8-bit, 16-bit and 32-bit images. It can read many image formats.
Molecular Dynamics Showcase
14 Oct 2013 | Tools | Contributor(s): Michael McLennan, Chen-Yu Li, john stone, Aleksei Aksimentiev, George A. Howlett
View interesting features of a molecular dynamics trajectory file
Molecular Dynamics Showcase Builder
09 Nov 2015 | Tools | Contributor(s): Michael McLennan, Nicholas K Kisseberth, George A. Howlett, Jim Slopsema, Aleksei Aksimentiev, Chen-Yu Li
Tool to create showcases for the Molecular Dynamics Showcase viewer.
5.0 out of 5 stars
22 Jan 2014 | Tools | Contributor(s): Prashant K Jain, Nahil Sobh, Jeremy Smith, AbderRahman N Sobh, Sarah White, Jacob Faucheaux, John Feser
Calculate scattering and absorption of light by targets with arbitrary geometries and complex refractive index.
24 Sep 2014 | Tools | Contributor(s): AbderRahman N Sobh, Sarah White, Jeremy Smith, Nahil Sobh, Prashant K Jain
Combines the Discrete Dipole Scattering (DDSCAT) tool with the DDAConvert tool for a single workflow for custom shapes.
07 Mar 2014 | Tools | Contributor(s): Taha Goudarzi, AbderRahman N Sobh, Kathy Walsh, Nahil Sobh, Iwona Jasiuk
Nanoindentation for Mechanical Characterization of Soft Materials
10 Jul 2008 | Tools | Contributor(s): Feifei Lian, Feifei Lian, Feifei Lian
This tool performs a self-consistent simulation of the current-voltage curve of a metallic single-wall carbon nanotube with Joule heating.
Quantum and Semi-classical Electrostatics Simulation of SOI Trigates
04 Mar 2008 | Tools | Contributor(s): Hyung-Seok Hahm, Andres Godoy
Generate quantum/semi-classical electrostatic simulation results for a simple Trigate structure
Traction Force Microscopy
29 Jan 2015 | Tools | Contributor(s): Bara Saadah, AbderRahman N Sobh, Alireza Tofangchi
This is a tool for particle motion tracking with respect to physical forces.
[Illinois]: Avoidance Learn Simulation
01 Jul 2013 | Tools | Contributor(s): AbderRahman N Sobh, NanoBio Node, Jessica S Johnson
This script simulates avoidance conditioning as reinforcement learning with two upper motoneurons (SUMO and FUMO).
[Illinois]: Avoidance Learn Simulation with 'Call' Neuron
This script simulates avoidance learning as a reinforcement learning with two upper motoneurons (sumo and fumo) and one "call" neuron.
[Illinois]: Error Gradient Estimations Due to Parallel Perturbation of Weights
15 Aug 2013 | Tools | Contributor(s): AbderRahman N Sobh, Jessica S Johnson, NanoBio Node
This tool trains two-layered networks of sigmoidal units to associate patterns using simultaneous perturbation of weights.
[Illinois]: Error Gradient Estimations Due to Perturbation of One Weight at a Time
09 Jul 2013 | Tools | Contributor(s): AbderRahman N Sobh, Jessica S Johnson, NanoBio Node
This tool trains two-layered networks of sigmoidal units to associate patterns using perturbation of one weight at a time.