Tags: nano/bio

Resources (21-40 of 432)

  1. [Illinois] Cooperation and Construction: From Multicellularity to Eusociality

    28 Apr 2014 | Online Presentations | Contributor(s): Corina Tarnita

    The evolutionary trajectory of life on earth is one of increasing size and complexity. Yet the standard equations of evolutionary dynamics describe mutation and selection among similar organisms...

    https://nanohub.org/resources/20932

  2. Nanoindentation

    28 Oct 2013 | Tools | Contributor(s): Taha Goudarzi, AbderRahman N Sobh, Kathy Walsh, Nahil Sobh, Iwona Jasiuk

    Nanoindentation for Mechanical Characterization of Soft Materials

    https://nanohub.org/resources/nanoindentation

  3. nanoDDSCAT

    23 Apr 2013 | Tools | Contributor(s): Prashant K Jain, Nahil Sobh, Jeremy Smith, AbderRahman N Sobh, Sarah White, Jacob Faucheaux, John Feser

    Calculate scattering and absorption of light by targets with arbitrary geometries and complex refractive index.

    https://nanohub.org/resources/dda

  4. cadnano to PDB File Converter

    13 Nov 2013 | Tools | Contributor(s): Jejoong Yoo, AbderRahman N Sobh, Chen-Yu Li, Aleksei Aksimentiev

    Accepts CadNano files in the form of *.json and outputs a file in *.pdb which can be read by programs such as VMD.

    https://nanohub.org/resources/cadnanocvrt

  5. Functionalization Workbench

    30 Aug 2013 | Tools | Contributor(s): AbderRahman N Sobh, Chen-Yu Li

    Using molecular dynamic simulation - explore the interactions between a molecular structure and substrate when they are linked together.

    https://nanohub.org/resources/partsub

  6. [Illinois] Graphene Synthesis from Biochar using Wet Chemical Treatment Process

    17 Dec 2013 | Online Presentations | Contributor(s): Sriraam Chandrasekaran

    Biochar is a major by-product from pyrolysis and gasification of biomass. Biochar finds potential applications in soil amendment, carbon sequestration, super capacitors, adsorbents, etc. However,...

    https://nanohub.org/resources/19482

  7. Tensile Mechanics of alpha-Helical Polypeptides

    30 Aug 2013 | Tools | Contributor(s): Korosh Torabi, George C. Schatz

    This model is capable of making quantitatively accurate predictions of force-extension behavior of a given helix-forming polypeptide sequence including its dependence on pH, temperature and ionic...

    https://nanohub.org/resources/ahpull

  8. Molecular Dynamics Showcase

    06 Jul 2013 | Tools | Contributor(s): Michael McLennan, Chen-Yu Li, john stone, Aleksei Aksimentiev

    View interesting features of a molecular dynamics trajectory file

    https://nanohub.org/resources/mdshowcase

  9. [Illinois] Physics 550 Biomolecular Physics

    05 Sep 2013 | Courses | Contributor(s): Klaus Schulten, Taekjip Ha

        Physical concepts governing the structure and function of biological macromolecules; general properties, spatial structure, energy levels, dynamics and functions, and...

    https://nanohub.org/resources/19299

  10. Neural Systems Modeling Ch10-13 Master Tool

    02 Aug 2013 | Tools | Contributor(s): Jessica S Johnson, NanoBio Node

    Combination of all tools used in Chapters 10-13 of Neural Systems Modeling by Anastasio

    https://nanohub.org/resources/nsmch10master

  11. [Illinois]: Neural Systems Modeling Ch 6-9 Master Tool

    26 Jul 2013 | Tools | Contributor(s): Jessica S Johnson, NanoBio Node

    Combination of all tools used in Chapters 6-9 of Neural Systems Modeling by Anastasio

    https://nanohub.org/resources/nsmch6master

  12. [Illinois]: Error Gradient Estimations Due to Parallel Perturbation of Weights

    07 Jul 2013 | Tools | Contributor(s): AbderRahman N Sobh, Jessica S Johnson, NanoBio Node

    This tool trains two-layered networks of sigmoidal units to associate patterns using simultaneous perturbation of weights.

    https://nanohub.org/resources/pertgradll

  13. [Illinois]: Perturbative Reinforcement Learning to Develop Distributed Representations

    10 Jul 2013 | Tools | Contributor(s): AbderRahman N Sobh, Jessica S Johnson, NanoBio Node

    This tool trains three-layered networks of sigmoidal units to associate patterns.

    https://nanohub.org/resources/pertdistrep

  14. [Illinois]: Perturbative Reinforcement Learning Using Directed Drift

    10 Jul 2013 | Tools | Contributor(s): AbderRahman N Sobh, Jessica S Johnson, NanoBio Node

    This tool trains two-layered networks of sigmoidal units to associate patterns using a real-valued adaptation of the directed drift algorithm.

    https://nanohub.org/resources/pertdd

  15. [Illinois]: Temporal Difference, Iterative Dynamic Programming, and Least Mean Squares

    11 Jul 2013 | Tools | Contributor(s): Bara Saadah, Nahil Sobh, AbderRahman N Sobh, Jessica S Johnson

    This tool updates state values using the Temporal Difference Algorithm.

    https://nanohub.org/resources/tempdiff

  16. Crystalline Cellulose - Atomistic Toolkit

    17 Jul 2013 | Tools | Contributor(s): Mateo Gómez Zuluaga, Robert J. Moon, Fernando Luis Dri, Pablo Daniel Zavattieri

    Crystalline Cellulose - Atomistic Toolkit

    https://nanohub.org/resources/ccamt

  17. [Illinois] GEM4 Bionanotechnology Summer Institute 2013

    01 Aug 2013 | Workshops

    INSTITUTE FOCUS: Cancer Nanotechnology and Cellular Mechanics OBJECTIVES The overall objective is to enhance the ability to address overarching challenges in the areas of Cancer...

    https://nanohub.org/resources/19040

  18. [Illinois]: Direction Selectivity

    13 Jul 2013 | Tools | Contributor(s): Bara Saadah, Nahil Sobh, AbderRahman N Sobh, Jessica S Johnson, NanoBio Node

    This tool implements a simple direction selective network.

    https://nanohub.org/resources/dirselectivity

  19. [Illinois]: Predict Correct Set Up

    15 Jul 2013 | Tools | Contributor(s): Bara Saadah, Nahil Sobh, AbderRahman N Sobh, Jessica S Johnson, NanoBio Node

    This tool sets up a predictor-corrector model of target tracking

    https://nanohub.org/resources/predcorsetup

  20. [Illiniois]: SynchUp

    16 Jul 2013 | Tools | Contributor(s): Bara Saadah, Nahil Sobh, AbderRahman N Sobh, Jessica S Johnson, NanoBio Node

    This tool computes synchronous updates of autoassociative networks.

    https://nanohub.org/resources/synchup