Tags: visualization

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Description

Simulators can produce all sorts of numbers, but the numbers themselves aren't terribly meaningful until they are put into context by visualization techniques. For example, the coordinates of the various atoms in a molecule don't readily convey the shape of the molecule, but once those coordinates are loaded into VMD, the the resulting picture conveys not only the shape of the molecule, but other important properties as well.

Learn more about visualization techniques from the resources on this site, listed below.

All Categories (1-20 of 52)

  1. Michael Worku

    https://nanohub.org/members/150665

  2. Exploring Materials Properties with Nanomaterial Mechanics Explorer Structure Files

    24 Mar 2016 | Teaching Materials | Contributor(s): Tanya Faltens

    This document describes how to generate and download simulation output files from the Nanomaterial Mechanics Explorer on nanoHUB and view them locally using OVITO. This can be particularly...

    https://nanohub.org/resources/23836

  3. axes label and the zero point

    Closed | Responses: 2

    It would be helpful to position the axes labels at the end of the each axis. The current display is not clear.

    Also the zero point is printed as a small number in scientific notation...

    https://nanohub.org/answers/question/1403

  4. [Illinois] Introduction to Cell Visualization

    14 Jun 2013 | Online Presentations | Contributor(s): Emad Tajkhorshid

    Professor Emad Tajkhorshid speaks to University Laboratory High School students about his research in Computational Studies of Membranes and Membrane Associated Phenomena Membrane proteins are...

    https://nanohub.org/resources/18107

  5. Rappture Bootcamp 2.5: Advanced Visualization

    16 Jul 2012 | Online Presentations | Contributor(s): Michael McLennan

    https://nanohub.org/resources/14662

  6. Computer Graphics Imagery for Motion Pictures and Commercial Advertising: The Achievement of Highly-Realistic Images

    19 Aug 2011 | Online Presentations | Contributor(s): Kenneth Torrance

    The talk will review some of the underlying concepts from Radiation Heat Transfer that have now been implemented in synthetic images. In many cases, researchers in graphics have created...

    https://nanohub.org/resources/11796

  7. Embedding visualization software into a tool in Rappture

    Closed | Responses: 0

    Hello everyone,

    Is it possible to embed a third-party software GUI into one of my tool’s outputs through Rappture so that the user may use the visualization options available...

    https://nanohub.org/answers/question/823

  8. Electron Density in a Nanowire

    30 Jan 2011 | Animations | Contributor(s): Gerhard Klimeck, Saumitra Raj Mehrotra

    Electron Density in a circular Silicon nanowire transistor.

    https://nanohub.org/resources/10666

  9. Tunneling in an Nanometer-Scaled Transistor

    25 Jan 2011 | Animations | Contributor(s): Gerhard Klimeck, Mathieu Luisier, Neerav Kharche, George A. Howlett, Insoo Woo, David Ebert

    Electrons tunneling through the gate of an ultra-scaled transistor.

    https://nanohub.org/resources/10537

  10. Goranka Bilalbegovic

    https://nanohub.org/members/45672

  11. Sebastian Lee

    Sebastian Lee is an undergraduate student majoring in Industrial Engineering at Purdue University with a Specialization in Software Engineering. He is anticipated to graduate in May 2012 and plans...

    https://nanohub.org/members/44565

  12. Facio

    0.0 out of 5 stars 

    18 Oct 2008 | Downloads | Contributor(s): Masahiko Suenaga

    Facio is a 3D-graphics program for molecular modeling and visualization of quantum chemical calculations(GAMESS and Gaussian). It is a GUI for FMO (Fragment MO) calculation. Selected features...

    https://nanohub.org/resources/4628

  13. Northwestern University Initiative for Teaching Nanoscience

    0.0 out of 5 stars 

    20 Aug 2008 | Tools | Contributor(s): Baudilio Tejerina

    This package allows users to study and analyze of molecular properties using various electronic structure methods.

    https://nanohub.org/resources/nuitns

  14. Theoretical Electron Density Visualizer

    0.0 out of 5 stars 

    07 Jul 2008 | Tools | Contributor(s): Baudilio Tejerina

    TEDVis calculates and displays 3D maps of molecular ED and its derivatives from the wave function.

    https://nanohub.org/resources/tedvis

  15. UV/Vis Spectra simulator

    0.0 out of 5 stars 

    15 Apr 2008 | Tools | Contributor(s): Baudilio Tejerina

    This tool computes molecular electronic spectra.

    https://nanohub.org/resources/uvspec

  16. Computational Nanoscience, Lecture 4: Geometry Optimization and Seeing What You're Doing

    5.0 out of 5 stars 

    13 Feb 2008 | Teaching Materials | Contributor(s): Jeffrey C Grossman, Elif Ertekin

    In this lecture, we discuss various methods for finding the ground state structure of a given system by minimizing its energy. Derivative and non-derivative methods are discussed, as well as the...

    https://nanohub.org/resources/4035

  17. Molecular Structure Tracer

    0.0 out of 5 stars 

    05 Feb 2008 | Tools | Contributor(s): Baudilio Tejerina

    This tool provides a high quality display of molecular structures.

    https://nanohub.org/resources/MolST

  18. Electrons in Two Dimensions: Quantum Corrals and Semiconductor Microstructures

    5.0 out of 5 stars 

    04 Dec 2007 | Online Presentations | Contributor(s): Eric J. Heller

    The images generated by a scanning tunneling microscope are iconic. Some of the most famous are Don Eigler’s quantum corrals, which reveal not only the guest atoms on a surface but especially...

    https://nanohub.org/resources/3253

  19. SPMW A fresh look to amplitude-modulation AFM: Force minimization, interaction measurement, and the quest for high resolution

    0.0 out of 5 stars 

    03 Jul 2007 | Online Presentations | Contributor(s): Udo D. Schwarz

    Frequency modulation atomic force microscopy (FM-AFM) has been able to deliver high-resolution atomic-scale images in ultrahigh vacuum for over one decade. In addition, there have been recent...

    https://nanohub.org/resources/2208

  20. From Research to Learning in Chemistry through Visualization and Computation

    0.0 out of 5 stars 

    21 May 2007 | Online Presentations | Contributor(s): Eric Jakobsson

    Modern chemistry research and high school chemistry education are separated by institutional and geographical boundaries. As such, much of secondary chemistry education is still based on the...

    https://nanohub.org/resources/2725