What's New: Past Month

Tools feed

  1. PhysiCell: infected system and off-site immune system

    23 Apr 2019 | Contributor(s):: Parichit Sharma, Yafei Wang

    Studying the interaction between an ODE driven offsite system and a system under invasion through Agent Based Modelling in PhysiCell.

  2. Replication Competent Oncolytic Virus expressing secretable trimeric TRAIL: hypothesis testing

    23 Apr 2019 | Contributor(s):: Adrianne Jenner, Paul Macklin

    Using PhysiCell to simulate a replication competent oncolytic virus expressing secretable trimeric TRAIL which induces apoptosis in nearby cells

  3. Wound Healing - Physicell

    22 Apr 2019 | Contributor(s):: Juliano Ferrari Gianlupi, Vedang Narain

    Wound healing simulation using physicell

  4. Jupyter Notebook (hub version 6.0)

    18 Apr 2019 | Contributor(s):: Martin Hunt

    Jupyter notebook running in anaconda-6 environment

  5. Replication Competent Oncolytic Virus in Epithelial cell layer

    18 Apr 2019 | Contributor(s):: Adrianne Jenner, Paul Macklin

    PhysiCell simulation of a replication competent oncolytic virus release from two veins, diffusing through a layer of epithelial cells.

  6. CompuCell3D - Bacterium Macrophage

    17 Apr 2019 | Tools | Contributor(s):: Juliano Ferrari Gianlupi, Somogyi, Andy T

    Simulation of macrophage chasing bacterium

  7. Spatial Pattern Formation in Cell Based Models

    17 Apr 2019 | Tools | Contributor(s):: Ben Duggan, John Metzcar

    Exploring spatial pattern formation in cell-based models, starting with Turing patterns in PhysiCell

  8. Polyvalent Nanoparticle Binding Simulator

    16 Apr 2019 | Tools | Contributor(s):: Nilsson, Lauren, JCS Kadupitiya, Vikram Jadhao

    Simulates the binding of ligand-decorated nanoparticles to cell membrane driven by ligand-cell-receptor attraction

  9. CompuCell3D Vascular Tumor

    16 Apr 2019 | Tools | Contributor(s):: Juliano Ferrari Gianlupi, Somogyi, Andy T

    Simulate 3D vascular tumor with CompuCell3D

  10. Physicell: liver tissue mechanobiology

    15 Apr 2019 | Tools | Contributor(s):: Yafei Wang, Paul Macklin

    An ABM simulating the liver tissue mechanobiology on cancer metastatic seeding with PhysiCell

  11. PhysiCell_mscb_class

    12 Apr 2019 | Tools | Contributor(s):: Yafei Wang

    simulation of ABM model

  12. SNaP SnP Utilities

    11 Apr 2019 | Tools | Contributor(s):: Jackson Anderson

    A web-based SnP/Touchstone file viewer.

  13. CompuCell3D 3D Cell Sorting

    09 Apr 2019 | Tools | Contributor(s):: Somogyi, Andy T

    CompuCell3D based application to simulate 3D cell sorting

  14. CompuCell Cell Sorting Tool

    09 Apr 2019 | Tools | Contributor(s):: Somogyi, Andy T

    simulate cell sorting with compucell 3d