Binary Nanoparticle Superlattice Simulator
Tools | 07 Mar 2021 | Contributor(s): Vinita Boolchandani, Nicholas E. Brunk, JCS Kadupitiya, Vikram Jadhao
This app simulates assembly of two types of virus-like particles into superstructures mediated by oppositely-charged linkers.
Shape-changing Nanoparticles for Nanomedicine Applications
Online Presentations | 04 Feb 2021 | Contributor(s): Vikram Jadhao
I will describe the nanoHUB tool “Nanoparticle Shape Lab” that enables simulations of the shape deformation of charged nanoparticles for a broad variety of nanoparticle material properties including nanoparticle surface charge, pattern, elasticity and solution conditions such...
Shape Changing Nanocontainers Tutorial
Online Presentations | 22 Apr 2020 | Contributor(s): Vikram Jadhao
Course material companion materials for nanoparticle shape lab. Four files are associated with this course material: two video lectures, companion powerpoint slides, and a homework problem set.
Souffle: Virus Capsid Assembly Lab
Tools | 01 Apr 2020 | Contributor(s): Nilsson, Lauren, JCS Kadupitiya, Vikram Jadhao
Simulate assembly of flexible capsomeres into virus capsids and oligomers
Nanoparticle Shape Lab
Tools | 10 Jan 2020 | Contributor(s): JCS Kadupitiya, Nicholas E. Brunk, Vikram Jadhao
Simulates the low-energy shapes of nanocontainers over a wide range of solution conditions
Polyvalent Nanoparticle Binding Simulator
Tools | 16 Apr 2019 | Contributor(s): Nilsson, Lauren, JCS Kadupitiya, Vikram Jadhao
Simulates the binding of ligand-decorated nanoparticles to cell membrane driven by ligand-cell-receptor attraction
Nanoscale Simulations & Engineering Applications: Applications - Self-Assembly in Nanoconfinement
Online Presentations | 04 Feb 2019 | Contributor(s): Vikram Jadhao
Nanoparticle Assembly Lab
Tools | 28 Jan 2019 | Contributor(s): Nicholas Brunk, JCS Kadupitiya, Masaki Uchida, Douglas, Trevor, Vikram Jadhao
Simulate assembly of nanoparticles into aggregates in physiological conditions.
Nanosphere Electrostatics Lab
Tools | 22 May 2018 | Contributor(s): JCS Kadupitiya, Nicholas Brunk, Sohile Ali, Fox, Geoffrey C., Vikram Jadhao
The Nanosphere Electrostatics Lab empowers users to simulate the self-assembly of ions near a spherically shaped nanoparticle, and extract the effective electrostatic properties.
Ions in Nanoconfinement
Tools | 22 Dec 2017 | Contributor(s): Kadupitige Kadupitiya, Nasim Anousheh, Suresh Marru, Fox, Geoffrey C., Vikram Jadhao
The Ions in Nanoconfinement app empowers users to simulate ions confined between material surfaces that are nanometers apart, and extract the associated ionic structure.