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Hud Wahab

How to download upload own data to project folder?

I am running the megnet tutorial notebooks https://proxy.nanohub.org/weber/1827880/fu4MwgbGH624tNOR/5/notebooks/megnet.ipynb?

I'd like to add my own dataset so use the code directly, how do I upload the dataset to folder from which the notebook is launched from?

`pwd` gives me 

'/home/nanohub/hudwahab/data/results/1827880/megnet'

Alternatively, how do I download the `data` folder from the path so I can run megnet locally?

 

Cheers, Hud

  1. data upload
  2. Download

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7 Responses

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    Tanya Faltens

    Hi Hud,

    Please see this nanoHUB FAQ on accessing your files: https://nanohub.org/kb/tips/managefiles

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    Richard Hayes

    To upload your own dataset to the folder from which the notebook is launched, you can use the Jupyter Notebook interface. Click on the "Upload" button, select your dataset here, and upload it to the desired location, which, in this case, is '/home/nanohub/hudwahab/data/results/1827880/megnet'. You can then access the data in your notebook.

    If you want to download the 'data' folder from the provided path, you can use the Jupyter interface to download the folder as a zip file. Right-click on the 'data' folder, select "Download," and it will be downloaded to your local machine.

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    Barbara Daniels

    Same problem facing with me.

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    Alex Lite

    Thanks for the post and answers. I'm glad that I found it cuz I were facing the problem but looked for solution at site

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    Matty Alexi Jameson

    To upload your own dataset to the project folder and use it in the MEGNet tutorial notebooks, follow these steps. First, navigate to the project folder where the notebook is located using the cd command. Once in the correct directory, use the Jupyter notebook interface to upload your dataset. Click on the "Upload" button and select the files you want to add. After uploading, you can access your dataset directly from the notebook. If you prefer to run MEGNet locally, download the data folder from the given path by using the wget command or downloading it manually. Then, place the data folder in the same directory as your local MEGNet notebook to access the dataset for local execution. This is how I managed to do it here on our site and the final result is quite well, I think. 

    Regards, guys!

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