cadnano to PDB File Converter

By Jejoong Yoo1, AbderRahman N Sobh1, Chen-Yu Li1, Aleksei Aksimentiev1

1. University of Illinois at Urbana-Champaign

Accepts CadNano files in the form of *.json and outputs a file in *.pdb which can be read by programs such as VMD.

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Version 1.4c - published on 20 Jul 2016

doi:10.4231/D3SB3X05F cite this

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Usage

World usage

Location of all "cadnano to PDB File Converter" Users Since Its Posting

Simulation Users

260

8 15 15 31 39 39 42 43 47 53 58 62 68 71 75 80 83 90 96 99 106 109 111 116 121 125 127 139 147 151 159 165 168 178 186 192 196 199 203 207 214 218 224 228 230 230 236 240 242 244 245 252 254 258 260

Users By Organization Type
Type Users
Unidentified 216 (83.08%)
Educational - University 39 (15%)
National Lab 3 (1.15%)
Government Agency 1 (0.38%)
Industry 1 (0.38%)
Users by Country of Residence
Country Users
us UNITED STATES 21 (60%)
in INDIA 4 (11.43%)
dz ALGERIA 3 (8.57%)
gr GREECE 1 (2.86%)
at AUSTRIA 1 (2.86%)
jp JAPAN 1 (2.86%)
br BRAZIL 1 (2.86%)
pe PERU 1 (2.86%)
fr FRANCE 1 (2.86%)
be BELGIUM 1 (2.86%)

Simulation Runs

3,043

28 86 99 160 205 209 230 248 263 329 385 437 490 552 575 613 637 684 723 784 916 1020 1066 1184 1296 1374 1459 1585 1668 1710 1757 1801 1846 1958 2064 2172 2264 2315 2354 2388 2834 2897 2969 2987 3037 3070 3138 3214 3293 3399 3511 3610 3031 3038 3043
Overview
Average Total
Wall Clock Time 8.48 hours 621.81 days
CPU time 12.05 minutes 14.73 days
Interaction Time 2.04 hours 149.28 days