cadnano to PDB File Converter

By Jejoong Yoo1, AbderRahman N Sobh1, Chen-Yu Li1, Aleksei Aksimentiev1

1. University of Illinois at Urbana-Champaign

Accepts CadNano files in the form of *.json and outputs a file in *.pdb which can be read by programs such as VMD.

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Version 1.4c - published on 20 Jul 2016

doi:10.4231/D3SB3X05F cite this

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Usage

World usage

Location of all "cadnano to PDB File Converter" Users Since Its Posting

Simulation Users

274

8 15 15 31 39 39 42 43 47 53 58 62 68 71 75 80 83 90 96 99 106 109 111 116 121 125 127 139 147 151 159 165 168 178 186 192 196 199 203 207 214 218 224 228 230 230 236 240 242 244 245 252 254 258 260 263 266 268 273 274

Users By Organization Type
Type Users
Unidentified 229 (83.58%)
Educational - University 40 (14.6%)
National Lab 3 (1.09%)
Government Agency 1 (0.36%)
Industry 1 (0.36%)
Users by Country of Residence
Country Users
us UNITED STATES 21 (60%)
in INDIA 4 (11.43%)
dz ALGERIA 3 (8.57%)
gr GREECE 1 (2.86%)
at AUSTRIA 1 (2.86%)
jp JAPAN 1 (2.86%)
br BRAZIL 1 (2.86%)
no NORWAY 1 (2.86%)
gb UNITED KINGDOM 1 (2.86%)
fr FRANCE 1 (2.86%)

Simulation Runs

3,204

28 86 99 160 205 209 230 248 263 329 385 437 490 552 575 613 637 684 723 784 916 1020 1066 1184 1296 1374 1459 1585 1668 1710 1757 1801 1846 1958 2064 2172 2264 2315 2354 2388 2450 2497 2548 2561 2594 2619 2662 2711 2764 2835 2897 2966 3031 3032 3044 3089 3131 3142 3202 3204
Overview
Average Total
Wall Clock Time 7.94 hours 629.81 days
CPU time 11.5 minutes 15.2 days
Interaction Time 1.91 hours 151.81 days