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CompuCell3D - Simulation of cell crawling in 3D
03 Feb 2022
Deploys the CompuCell3D simulation of cell crawling in 3D by Fortuna et al. 2020 https://doi.org/10.1016/j.bpj.2020.04.024
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Cancer Evolution in CompuCell3D
27 May 2021 | Contributor(s):: Juliano Ferrari Gianlupi, James A Glazier
Demonstrates implemetation of cancer evolution in CompuCell3D
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Lauren Takiguchi
https://nanohub.org/members/322955
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Dinesh Ramkrushna Rotake
Dinesh Rotake received the B.Sc.(Computer Science) and B.E. (Electronics) degree from Nagpur University, Nagpur, India, in 2004, 2009 respectively, the M.Tech degree in VLSI Design from G.H....
https://nanohub.org/members/301075
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Multicellular modeling of SARS-CoV-2 dynamics and virion mediated cell fusion with antiviral drug effects
27 Jul 2020 | | Contributor(s):: Yafei Wang, Michael Getz, Randy Heiland, Paul Macklin
Simulate SARS-CoV-2 dynamics and virion mediated cell fusion under pharmacodynamics effects with PhysiCell
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CompuCell3D - Simulation of angiogenesis
04 Jun 2020 | | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
CompuCell3D simulates angiogenesis using chemical signals
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Multiscale Multicellular Modeling of Tissue Function and Disease using CompuCell3D
03 Jun 2020 | | Contributor(s):: James A Glazier, Juliano Ferrari Gianlupi
Multiscale multicellular models combine representations of subcellular biological networks, cell behaviors, tissue level effects and whole body effects to describe tissue outcomes during development, homeostasis and disease. I will briefly introduce these simulation methodologies, the CompuCell3D...
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Nanopartículas y Protectores Solares (Nanoparticles and Sunscreen)
22 Apr 2020 | | Contributor(s):: Nano-Link Center for Nanotechnology Education, Thomas Deits, Jim Marti (editor), Rodfal A. Rodríguez (editor), María T. Rivera (editor)
En esta actividad, los estudiantes son introducidos a la función de los protectores solares y aprenden cómo se pueden utilizar las nanopartículas para proteger a las personas de la radiación ultravioleta (UV). Utilizan papel foto-crómico como sensor UV,...
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Nanoparticles and Sunscreen
16 Apr 2020 | | Contributor(s):: Nano-Link Center for Nanotechnology Education, Thomas Deits, Jim Marti (editor), Christopher Kumm
In this module, students are introduced to the function of sunscreen and learn how nanoparticles can be used to protect people from ultraviolet radiation. They use photochromic paper as a UV sensor, place samples of different types of sunscreen over this UV sensor, expose their samples to...
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PhysiCell model for COVID19
26 Mar 2020 | | Contributor(s):: Randy Heiland, Yafei Wang, Paul Macklin
Prototype 2-D multicellular simulation of COVID19.
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PhysiCell model with SBML intracellular model
10 Feb 2020 | | Contributor(s):: Randy Heiland
Each cell will have its own intracellular (metabolic) model that will affect the microenvironment.
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pc4thanos : Thanos vs. Avengers multicellular demonstrator
31 Jan 2020 | | Contributor(s):: Paul Macklin
PhysiCell Thanos vs. Avengers demonstrator for multicellular simulation techniques
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PhysiCell biorobots simulation
12 Nov 2019 | | Contributor(s):: Randy Heiland, Paul Macklin
2D sim of director, worker, and cargo cells.
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Nanosphere Electrostatics Lab Tutorial
11 Nov 2019 | | Contributor(s):: Jayanath Chamindu Sandanuwan Kadupitiya Kadupitige, Ballard, Joshua Brendan
Accurate knowledge of ionic structure & dynamics is critical to study nanoparticle dynamics. Nanoparticles are polarized in most solvents. Simulating the dynamics of ions near polarizable nanoparticles is challenging: Need to solve Poisson equation at every timestep....
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Farhana Twaha
https://nanohub.org/members/265317
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Nanoscale Simulations & Engineering Applications: Applications - Self-Assembly in Nanoconfinement
04 Feb 2019 | | Contributor(s):: Vikram Jadhao
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PhysiCell cancer biorobots simulation
28 Jan 2019 | | Contributor(s):: Randy Heiland, Paul Macklin
2D simulation of biorobots delivering a drug to cancer cells
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James J Marti
James Marti is the Senior Scientist and Outreach Coordinator for the Minnesota Nano Center, an applied nanotechnology research center located at the University of Minnesota in Minneapolis. Dr....
https://nanohub.org/members/216143
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Subash N
https://nanohub.org/members/204739
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Syed Mohammad Ashab Uddin
https://nanohub.org/members/187030