Running a Python 3 Script in a nanoHUB Jupyter Notebook
01 May 2020 | | Contributor(s):: Tanya Faltens
This tutorial will show you how to create and run Python 3 code in a Jupyter notebook, rather than creating and running a Python script. We are working along with Chapter 1.8 “Writing a program” in the Python for Everybody course. In this lesson they execute a Python script that...
Setting up Your nanoHUB File Structure in Jupyter Notebooks
17 Apr 2020 | | Contributor(s):: Tanya Faltens
This tutorial takes you through the steps to set up your nanoHUB file structure in Jupyter Notebooks.Be sure to get a copy of the pdf that accompanies the video instructions by clicking on the Supporting Docs tab for this resource.
Uncertainty Quantification Tutorial using Jupyter Notebooks
02 Oct 2018 | | Contributor(s):: Ilias Bilionis
Increasing modeling detail is not necessarily correlated with increasing predictive ability. Setting modeling and numerical discretization errors aside, the more detailed a model gets, the larger the number of parameters required to accurately specify its initial/boundary conditions,...
13 Jul 2018 |
Posted by Jesse Lee Hoffman
Introduction to Molecular Dynamics Showcase
13 Feb 2017 | | Contributor(s):: Chen-Yu Li, Karl Steven Decker (editor), Aleksei Aksimentiev
In this tutorial, we will demonstrate how to use the MD showcase builder tool to create a showcase. We will start from the simplest example – creating a showcase from a PDB file – and move on to more complicated examples. We will also cover how to add a description, change...
Dec 13 2016
Introduction to Jupyter Notebooks on nanoHUB - Tutorial
Exploring Materials Properties with Nanomaterial Mechanics Explorer Structure Files
24 Mar 2016 | | Contributor(s):: Tanya Faltens
This document describes how to generate and download simulation output files from the Nanomaterial Mechanics Explorer on nanoHUB and view them locally using OVITO. This can be particularly useful for more advanced manipulations of the trajectory files, and for sharing files with others, such...
Recommended video lectures for beginners in Matlab and Python
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I am master student in Material science and Nanotechnology, and would like to study MATLAB and Python in close relation with...
NEMO5 2014 Summer Hands-on session materials
02 Jan 2015 |
This download resource contains the materials for NEMO5 2014 Summer hands-on sessions. It contains 8 sessions with related presentations, input decks, reference results.The contents of each session are list below:Session 1: Simulating UTBs and Nanowires with Quantum Transmitting Boundary Method...
NEMO5 Tutorial 5A: Devi ce Simulation - Quantum Dots
17 Jul 2012 | | Contributor(s):: Jean Michel D Sellier
This presentation introduces the capabilities of NEMO5 to simulate quantum dots.
NEMO5 Tutorial 3: Models
This tutorial presents the models implemented in NEMO5. A description on how the solvers interact with each other is reported along with the options of the various solvers. An example on how to make a simulation that involves strain calculations, Schroedinger wave functions calculations and an...
The Pioneers of Quantum Computing
19 Nov 2010 | | Contributor(s):: David P. Di Vincenzo
This talk profiles the persons whose insights and visions created the subject of quantum information science. Some famous, some not, they all thought deeply about the puzzles and contradictions that were apparent to the founders of quantum theory. After many years of germination, the confluence...
Nano*High: Nature's Nasty Nanomachines: How Viruses Work, and How We Can Stop Them
25 Sep 2010 | | Contributor(s):: Carolyn R. Bertozzi
The birth and growth of nanotechnology is only a few decades old, whereas Nature has been building nano-machines for millennia. Viruses are marvels of natural nano-engineering, but can pose a problem for human health. To combat these nano-machines, scientists are turning to recent developments in...
Nano*High: X-rays, Lasers, and Molecular Movies
25 Sep 2010 | | Contributor(s):: Roger W. Falcone
X-ray imaging is an excellent method to make visible what would normally be invisible - who hasn't had an X-ray at the doctor or dentist's office before? At the Lawrence Berkeley National Lab, the Advanced Light Source is a gigantic X-ray imaging machine. Dr. Roger Falcone discusses X-ray...
2010 Nano-Biophotonics Summer School @ UIUC Lecture 5 - Biomedicine - A tour of the Cell
25 Sep 2010 | | Contributor(s):: Marina Marjanovic
Edited and Uploaded by Omar Sobh, University of Illinois at Urbana-Champaign
2010 Nano-Biophotonics Summer School @ UIUC Lecture 1 - Introduction
20 Sep 2010 | | Contributor(s):: Rashid Bashir, Stephen Boppart
Jul 12 2010
2010 NCN@Purdue Summer School: Electronics from the Bottom Up
Conjugate Gradient Tutorial
08 Jun 2010 | | Contributor(s):: Dragica Vasileska
This is an extensive tutorial on the description and implementation of the basic conjugate gradient method and its variants.
This set of slides describe the idea behind the multigrid method and its implementation.
Empirical Pseudopotential Method: Theory and Implementation
17 May 2010 | | Contributor(s):: Dragica Vasileska
This tutorial first teaches the users the basic theory behind the Empirical Pseudopotential (EPM)Bandstructure Calculation method. Next, the implementation details of the method are described and finally a MATLAB implementation of the EPM is provided.vasileska.faculty.asu.eduNSF