How does the code scales with the number of monomers to polymerise?
I have been trying to polymerise a box of 25000 monomers of parylene C, but the stage when the "polym.pl" is looking for pairs takes quite a bit of time. I am wondering if I have any chance to complete a few polymerisation steps with a box containing that many monomers.
Is there any way to accelerate or parallelise the task of finding pairs?
Many thanks!
Maxime