Resources (81-100 of 647)

1. PhysiCell biorobots simulation

   Tools | 12 Nov 2019 | Contributor(s):: Randy Heiland, Paul Macklin

   2D sim of director, worker, and cargo cells.

2. Biological 3D Structures by Cryo-EM: Challenges in Computations and Instruments

   Online Presentations | 23 Oct 2019 | Contributor(s):: Wen Jiang

   Single particle cryo-EM is revolutionizing structural biology. Many structures of viruses and protein complexes have been determined to 2-4 Å resolutions. While stable structures that can be expressed/purified in large quantities can be solved routinely, the dynamic compositions and...

3. Motility Training App for PhysiCell

   Tools | 17 Oct 2019 | Contributor(s):: Furkan Kurtoglu, Aneequa Sundus, Kali Nicole Konstantinopoulos, Drew Willis, Mary Chen, Randy Heiland, Paul Macklin

   Training application for "Motility" concept in PhysiCell.

4. Soft Materials for Studying Hard Biological Problems

   Online Presentations | 15 Oct 2019 | Contributor(s):: Kristi S. Anseth

    This talk will illustrate how we leverage these and other reversible chemistries to create biologically responsive hydrogel matrices, and employ them to study the effects of matricellular signaling on diverse cellular functions and processes.  For example, we exploit...

5. Motility Training App

   Tools | 20 Sep 2019 | Contributor(s):: Furkan Kurtoglu, Aneequa Sundus, Kali Nicole Konstantinopoulos, Mary Chen, Drew Willis, Randy Heiland, Paul Macklin

   Training application for "Motility" concept in PhysiCell.

6. Tellurium

   Tools | 26 Aug 2019 | Contributor(s):: Somogyi, Andy T

   1.0

7. Soft Electronic and Microfluidic Systems for the Skin

   Online Presentations | 23 May 2019 | Contributor(s):: John A. Rogers

   This talk describes the key ideas, and presents some of the most recent device examples, including wireless, skin-like electronic 'tattoos' for continuous monitoring of vital signs in neonatal intensive care, microfluidic/electronic platforms that can capture, store and perform...

8. Multi-species Biofilm on Wound Surface

   Tools | 01 May 2019 | Contributor(s):: Furkan Kurtoglu, Aneequa Sundus

   This is a class project that aims modeling two-species biofilm that grows on a wound

9. AMIGOS - Hypoxia

   Tools | 25 Apr 2019 | Contributor(s):: Furkan Kurtoglu, John Metzcar, Kali Nicole Konstantinopoulos, Timothy M Mahajan, Randy Heiland, Paul Macklin

   Modeling Tumor in Hypoxic Condition

10. PhysiCell: infected system and off-site immune system

    Tools | 23 Apr 2019 | Contributor(s):: Parichit Sharma, Yafei Wang

    Studying the interaction between an ODE driven offsite system and a system under invasion through Agent Based Modelling in PhysiCell.

11. Replication Competent Oncolytic Virus expressing secretable trimeric TRAIL: hypothesis testing

    Tools | 23 Apr 2019 | Contributor(s):: Adrianne Jenner, Paul Macklin

    Using PhysiCell to simulate a replication competent oncolytic virus expressing secretable trimeric TRAIL which induces apoptosis in nearby cells

12. Wound Healing - Physicell

    Tools | 22 Apr 2019 | Contributor(s):: Juliano Ferrari Gianlupi, Vedang Narain

    Wound healing simulation using physicell

13. Replication Competent Oncolytic Virus in Epithelial cell layer

    Tools | 18 Apr 2019 | Contributor(s):: Adrianne Jenner, Paul Macklin

    PhysiCell simulation of a replication competent oncolytic virus release from two veins, diffusing through a layer of epithelial cells.

14. CompuCell3D - Bacterium Macrophage

    Tools | 17 Apr 2019 | Contributor(s):: Juliano Ferrari Gianlupi, Somogyi, Andy T

    Simulation of macrophage chasing bacterium

15. Spatial Pattern Formation in Cell Based Models

    Tools | 17 Apr 2019 | Contributor(s):: Ben Duggan, John Metzcar

    Exploring spatial pattern formation in cell-based models, starting with Turing patterns in PhysiCell

16. Polyvalent Nanoparticle Binding Simulator

    Tools | 16 Apr 2019 | Contributor(s):: Nilsson, Lauren, JCS Kadupitiya, Vikram Jadhao

    Simulates the binding of ligand-decorated nanoparticles to cell membrane driven by ligand-cell-receptor attraction

17. (CC3D v3 - old) CompuCell3D Vascular Tumor

    Tools | 16 Apr 2019 | Contributor(s):: Juliano Ferrari Gianlupi, Somogyi, Andy T

    Simulate 3D vascular tumor with CompuCell3D

18. PhysiCell: liver tissue mechanobiology

    Tools | 15 Apr 2019 | Contributor(s):: Yafei Wang, Randy Heiland, Paul Macklin

    An ABM simulating the impact of tumor-parenchyma biomechanics on liver metastatic progression with PhysiCell

19. PhysiCell_mscb_class

    Tools | 12 Apr 2019 | Contributor(s):: Yafei Wang

    simulation of ABM model

20. Wearable Sweat Sensors - Towards Big Data for Human Health

    Online Presentations | 04 Apr 2019 | Contributor(s):: Ali Javey

    In this talk, I will present our recent advancements on fully-integrated perspiration analysis system that can simultaneously measure sweat rate, metabolites, electrolytes and heavy metals, as well as the skin temperature to calibrate the sensors' response.