Tags: NCN Group - Biotechnology and Medicine


Education group: Biotechnology and Medicine.

Biotechnology and Medicine.

All Categories (1-20 of 35)

  1. Nanosphere Electrostatics Lab

    Tools | 22 May 2018 | Contributor(s):: JCS Kadupitiya, Nicholas Brunk, Sohile Ali, Fox, Geoffrey C., Vikram Jadhao

    The Nanosphere Electrostatics Lab empowers users to simulate the self-assembly of ions near a spherically shaped nanoparticle, and extract the effective electrostatic properties.

  2. CompuCell3D

    Tools | 16 May 2018 | Contributor(s):: Anwar Shaikh

    An open-source simulation environment for multi-cell, single-cell-based modeling of tissues, organs and organisms. Uses Cellular Potts Model to model cell behavior.

  3. pc4nanobio: cancer nanotherapy simulator

    Tools | 19 Apr 2018 | Contributor(s):: Yafei Wang, Randy Heiland, Paul Macklin

    Simulate cancer response to drug-loaded nanoparticles

  4. Ions in Nanoconfinement

    Tools | 22 Dec 2017 | Contributor(s):: Kadupitige Kadupitiya, Nasim Anousheh, Suresh Marru, Fox, Geoffrey C., Vikram Jadhao

    The Ions in Nanoconfinement app empowers users to simulate ions confined between material surfaces that are nanometers apart, and extract the associated ionic structure.

  5. [Illinois] Computational Structural Biology

    Online Presentations | 24 Apr 2017 | Contributor(s):: Emad Tajkhorshid

  6. [Illinois] Physics 598BP: Experimental Biophysics

    Courses | 11 Apr 2016 | Contributor(s):: Paul R Selvin

    This course provides training in advanced biophysical techniques through hands-on laboratory exercises and weekly lectures as background.  Topics will cover general optical and fluorescence spectroscopy, introduction to various microscope techniques - wide field, bright field, DIC,...

  7. [Illinois] BioNanotechnology Summer Institute 2015

    Workshops | 10 Nov 2015 | Contributor(s):: Aleksei Aksimentiev, Rashid Bashir, Richard Chadwick, Brian Cunningham, Amy Herr, Joseph M K Irudayaraj, Hyun Joon Kong, Ting Lu, Marina Marjanovic, Cathy Murphy, Shuming Nie, Scott Siechen, Ivan Smalyukh

    Twenty-six students, postdocs, and junior faculty from science and engineering disciplines from across the campus, the country, and overseas participated in the 2015 University of Illinois BioNanotechnology Summer Institute from July 27-August 7 at the Micro + Nanotechnology Lab, learning about...

  8. Molecular Dynamics Showcase Builder

    Tools | 09 Nov 2015 | Contributor(s):: Michael McLennan, Nicholas K Kisseberth, George A. Howlett, Jim Slopsema, Aleksei Aksimentiev, Chen-Yu Li

    Tool to create showcases for the Molecular Dynamics Showcase viewer.

  9. [Illinois] Biophysics 401: Introduction to Biophysics

    Courses | 17 Sep 2015 | Contributor(s):: Paul R Selvin

    Major concepts of physics inherent to biological systems. Basics of biology, including protein and DNA structure and their organization into cells with a focus on single molecule biophysics. Major experimental techniques including x-ray diffraction, optical and magnetic traps, and fluorescence...

  10. Cell Culture Basics Training

    Online Presentations | 19 Aug 2015 | Contributor(s):: Sophie A. Lelièvre, Shirisha Chittiboyina, Tim Kwok

    This series of videos combined with accompanying PowerPoint file comprise introductory training for Cell Culture Basics. This learning unit is part of the training required for access to the Three Dimensional Cell Culture Core (3D3C) facility at Purdue University.

  11. Ionic Interactions in Biological and Physical Systems: a Variational Treatment

    Online Presentations | 14 Feb 2014 | Contributor(s):: Bob Eisenberg

    All biology occurs in ionic mixtures loosely called Ringer solutions. Biology depends on interactions of ions. Interactions of Na+, K+, and Ca2+ with channel proteins produce electrical signals of nerves and coordinate muscle contraction including the heart. Proteins, channels, and nucleic acids...

  12. Mathematics of Ions in Channels and Solutions: Stochastic Derivations, Direct, Variational and Inverse Solutions that fit Data

    Online Presentations | 03 Feb 2014 | Contributor(s):: Bob Eisenberg

    Literally thousands of biologists study the properties of channels in experiments every day. My collaborators and I have shown how the relevant equations can be derived (almost) from stochastic differential equations, and how they can be solved in inverse, variational, and direct problems using...

  13. Functionalization Workbench

    Tools | 30 Aug 2013 | Contributor(s):: AbderRahman N Sobh, Chen-Yu Li, Nahil Sobh, Aleksei Aksimentiev

    Using molecular dynamic simulation - explore the interactions between a molecular structure and substrate when they are linked together.

  14. [Illinois] MCB 529 BRH Biological Rhythms in Health and Disease

    Courses | 24 Dec 2013 | Contributor(s):: Martha U. Gillette

    Our major research thrusts are to understand: 1) signals that engage the circadian clockwork in the brain, 2) sub-cellular micro-environments that shape neuronal dendrites in development and repair, and 3) emergent behaviors of integrated neuronal systems.

  15. [Illinois] Computational Microscopy for Health and Technology

    Online Presentations | 27 Sep 2013 | Contributor(s):: Klaus Schulten

    It is today becoming possible to view and study biological systems on the cellular scale using computational methods, offering insights into new solutions to mankind's health and energy needs. Engineers and scientists at our NIH Center for Macromolecular Modeling and Bioinformatics have...

  16. [Illinois] Interdisciplinary Symposium on Advanced Nano/Biosystems (Design, Fabrication, and Characterization)

    Workshops | 27 Sep 2013

    Symposium Dates and LocationWednesday, September 25-Friday, September 27, 2013Frederick Seitz Materials Research Laboratory, University of Illinois at Urbana-ChampaignUrbana, Illinois, USA  Program  Symposium Focus:Nano/bio systems have...

  17. [Illinois] MCB 493 Neural Systems Modeling

    Courses | 03 Feb 2013 | Contributor(s):: Thomas J. Anastasio

    The purpose of this independent study is to give students hands-on experience in using computers to model neural systems. A neural system is a system of interconnected neural elements, or units. Students will use existing computer programs which will simulate real neural systems. They will...

  18. Molecular Dynamics Showcase

    Tools | 06 Jul 2013 | Contributor(s):: Michael McLennan, Chen-Yu Li, john stone, Aleksei Aksimentiev, George A. Howlett

    View interesting features of a molecular dynamics trajectory file

  19. [Illinois] Physics 550 Biomolecular Physics

    Courses | 03 Sep 2013 | Contributor(s):: Klaus Schulten, Taekjip Ha

      Physical concepts governing the structure and function of biological macromolecules; general properties, spatial structure, energy levels, dynamics and functions, and relation to other complex physical systems such as glasses; recent research in biomolecular physics;...

  20. [Illinois] GEM4 Cellular and Molecular Mechanics with a focus on Developmental Biology Summer School 2012

    Workshops | 24 May 2013

    Cellular and Molecular Mechanics with a focus on Developmental Biology The 2012 GEM4 Summer School program consists of lectures in the mornings by experts in cellular and molecular mechanics and developmental biology, and hands-on labs in the afternoons on various experimental techniques in...